BLASTX nr result
ID: Coptis24_contig00022175
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00022175
(2369 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003624755.1| Cysteine synthase [Medicago truncatula] gi|3... 209 5e-59
ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chlor... 210 5e-58
ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chlor... 210 5e-58
ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chlor... 209 1e-57
ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chlor... 209 2e-57
>ref|XP_003624755.1| Cysteine synthase [Medicago truncatula] gi|355499770|gb|AES80973.1|
Cysteine synthase [Medicago truncatula]
Length = 368
Score = 209 bits (531), Expect(2) = 5e-59
Identities = 106/151 (70%), Positives = 123/151 (81%)
Frame = +2
Query: 1835 RVARLDSVISPQNVAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLES 2014
R + +S ++ RE L+ V+IAEDVTQLIG T MIYL KV GCVANVAAKLES
Sbjct: 39 RTIAATATVSTPSLFSTTREGLDAVNIAEDVTQLIGNTPMIYLNKVTDGCVANVAAKLES 98
Query: 2015 MEPCRSAKDRIGLSMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMP 2194
MEPCRS KDRIG SM+ADAEE+ ISPGKT+ VEPTTGNTG+G+AFVAATK YKLIVTMP
Sbjct: 99 MEPCRSVKDRIGYSMLADAEESGAISPGKTVLVEPTTGNTGLGLAFVAATKGYKLIVTMP 158
Query: 2195 ASINLERRLLLRAFGAEIILTDPAKGLKGAV 2287
AS+N+ERR+LLR FGAE++LT+ KGLKGAV
Sbjct: 159 ASVNIERRILLRTFGAEVVLTNAEKGLKGAV 189
Score = 48.1 bits (113), Expect(2) = 5e-59
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +3
Query: 2289 VDKTKEITHGTPNAYLFQQFDNRANTK 2369
VDK +EI +GTPNAY+F+QFDNR NTK
Sbjct: 189 VDKAEEIVYGTPNAYMFRQFDNRNNTK 215
>ref|XP_003554060.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 1
[Glycine max]
Length = 381
Score = 210 bits (534), Expect(2) = 5e-58
Identities = 106/143 (74%), Positives = 121/143 (84%)
Frame = +2
Query: 1859 ISPQNVAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAK 2038
+S + + R+ +TV+IAEDVTQLIG T M+YL KV GCVAN+AAKLESMEPCRS K
Sbjct: 50 VSSAPLVYSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVK 109
Query: 2039 DRIGLSMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERR 2218
DRIG SM++DAEE ISPGKTI VEPTTGNTG+GIAFVAATK YKLIVTMPASIN+ERR
Sbjct: 110 DRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASINVERR 169
Query: 2219 LLLRAFGAEIILTDPAKGLKGAV 2287
+LLRAFGAE++LTD KGLKGAV
Sbjct: 170 ILLRAFGAEVVLTDAEKGLKGAV 192
Score = 43.5 bits (101), Expect(2) = 5e-58
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 2289 VDKTKEITHGTPNAYLFQQFDNRANTK 2369
VDK +EI TPNAY+F+QFDN NTK
Sbjct: 192 VDKAEEIVRNTPNAYMFRQFDNMTNTK 218
>ref|XP_003554061.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 2
[Glycine max]
Length = 371
Score = 210 bits (534), Expect(2) = 5e-58
Identities = 106/143 (74%), Positives = 121/143 (84%)
Frame = +2
Query: 1859 ISPQNVAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAK 2038
+S + + R+ +TV+IAEDVTQLIG T M+YL KV GCVAN+AAKLESMEPCRS K
Sbjct: 50 VSSAPLVYSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVK 109
Query: 2039 DRIGLSMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERR 2218
DRIG SM++DAEE ISPGKTI VEPTTGNTG+GIAFVAATK YKLIVTMPASIN+ERR
Sbjct: 110 DRIGYSMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASINVERR 169
Query: 2219 LLLRAFGAEIILTDPAKGLKGAV 2287
+LLRAFGAE++LTD KGLKGAV
Sbjct: 170 ILLRAFGAEVVLTDAEKGLKGAV 192
Score = 43.5 bits (101), Expect(2) = 5e-58
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 2289 VDKTKEITHGTPNAYLFQQFDNRANTK 2369
VDK +EI TPNAY+F+QFDN NTK
Sbjct: 192 VDKAEEIVRNTPNAYMFRQFDNMTNTK 218
>ref|XP_003521872.1| PREDICTED: probable cysteine synthase, chloroplastic-like [Glycine
max]
Length = 372
Score = 209 bits (531), Expect(2) = 1e-57
Identities = 105/138 (76%), Positives = 119/138 (86%)
Frame = +2
Query: 1874 VAFHGREELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGL 2053
+ + R+ +TV+IAEDVTQLIG T M+YL KV GCVAN+AAKLESMEPCRS KDRIG
Sbjct: 56 LVYSTRQGFDTVNIAEDVTQLIGNTPMVYLNKVTEGCVANIAAKLESMEPCRSVKDRIGY 115
Query: 2054 SMIADAEENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRA 2233
SM++DAEE ISPGKTI VEPTTGNTG+GIAFVAATK YKLIVTMPAS+N+ERR+LLRA
Sbjct: 116 SMLSDAEEIGAISPGKTILVEPTTGNTGLGIAFVAATKGYKLIVTMPASVNVERRILLRA 175
Query: 2234 FGAEIILTDPAKGLKGAV 2287
FGAE+ILTD KGLKGAV
Sbjct: 176 FGAEVILTDAEKGLKGAV 193
Score = 43.1 bits (100), Expect(2) = 1e-57
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 2289 VDKTKEITHGTPNAYLFQQFDNRANTK 2369
VDK +EI H T NAY+F+QFDN NTK
Sbjct: 193 VDKAEEIVHSTNNAYMFRQFDNMTNTK 219
>ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chloroplastic-like [Vitis
vinifera] gi|296085861|emb|CBI31185.3| unnamed protein
product [Vitis vinifera]
Length = 390
Score = 209 bits (532), Expect(2) = 2e-57
Identities = 104/132 (78%), Positives = 119/132 (90%)
Frame = +2
Query: 1892 EELETVSIAEDVTQLIGRTRMIYLTKVVGGCVANVAAKLESMEPCRSAKDRIGLSMIADA 2071
E++ TV+IA+DVTQLIGRT MIYL KV GCVAN+AAKLESMEPCRS KDRIG SMI+DA
Sbjct: 77 EDIHTVNIADDVTQLIGRTPMIYLNKVTQGCVANIAAKLESMEPCRSVKDRIGYSMISDA 136
Query: 2072 EENDGISPGKTISVEPTTGNTGIGIAFVAATKVYKLIVTMPASINLERRLLLRAFGAEII 2251
EE ISPG++I VEPT+GNTG+GIAFVAATK YKLIVTMPASI++ERR+LLRAFGAEI+
Sbjct: 137 EETGAISPGRSILVEPTSGNTGLGIAFVAATKGYKLIVTMPASIDIERRILLRAFGAEIV 196
Query: 2252 LTDPAKGLKGAV 2287
LTDP KG+KGAV
Sbjct: 197 LTDPMKGIKGAV 208
Score = 42.4 bits (98), Expect(2) = 2e-57
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +3
Query: 2289 VDKTKEITHGTPNAYLFQQFDNRANTK 2369
VDK +EI PNAY+FQQFDN AN K
Sbjct: 208 VDKAEEIVQSMPNAYMFQQFDNMANAK 234