BLASTX nr result

ID: Coptis24_contig00022146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022146
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299528.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
gb|AEW69821.1| Hop-interacting protein THI138 [Solanum lycopersi...   154   7e-36
ref|XP_003532812.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-g...   150   1e-34
ref|XP_002509812.1| UDP-n-acetylmuramoylalanyl-d-glutamate--2,6-...   150   1e-34
ref|XP_003524456.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-g...   149   2e-34

>ref|XP_002299528.1| predicted protein [Populus trichocarpa] gi|222846786|gb|EEE84333.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score =  157 bits (397), Expect = 8e-37
 Identities = 80/122 (65%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   PLEGIVRGIEEVNSVPERCQLIDEEHAFGVIVEYAHTLDALSRLLDTVREFSPRRIITVI 182
           PLE IVRGIEE+++VP RC+LIDEE AFGVIV+YAHT DALSRLLD+VRE  P+RIITVI
Sbjct: 568 PLEDIVRGIEEIDAVPGRCELIDEEQAFGVIVDYAHTPDALSRLLDSVRELRPKRIITVI 627

Query: 183 GCGGDRDRGKRPMMAKIATNKSDVTMLKSNNPRTEDPFWCRKSITKILVFGL-WHLRKRL 359
           GCGG+RDRGKRP+M KIAT+KSD+T+L S+NPR EDP      I   ++ G+ W +++ L
Sbjct: 628 GCGGERDRGKRPIMTKIATDKSDMTILTSDNPRGEDPL----DILDDMLAGVGWSMQEYL 683

Query: 360 FH 365
            H
Sbjct: 684 KH 685


>gb|AEW69821.1| Hop-interacting protein THI138 [Solanum lycopersicum]
          Length = 771

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/97 (76%), Positives = 86/97 (88%)
 Frame = +3

Query: 3   PLEGIVRGIEEVNSVPERCQLIDEEHAFGVIVEYAHTLDALSRLLDTVREFSPRRIITVI 182
           PLE IV+GIEEV++VP RC+LIDEE AFGVIV+YAHT DALSRLLD VRE  PRR+ITV 
Sbjct: 562 PLEDIVKGIEEVDAVPGRCELIDEEQAFGVIVDYAHTPDALSRLLDYVRELGPRRVITVF 621

Query: 183 GCGGDRDRGKRPMMAKIATNKSDVTMLKSNNPRTEDP 293
           GC G+ DRGKRP+MAKIAT+KSDVT+L S+NP+TEDP
Sbjct: 622 GCAGESDRGKRPIMAKIATDKSDVTILTSDNPKTEDP 658


>ref|XP_003532812.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Glycine max]
          Length = 750

 Score =  150 bits (378), Expect = 1e-34
 Identities = 73/97 (75%), Positives = 86/97 (88%)
 Frame = +3

Query: 3   PLEGIVRGIEEVNSVPERCQLIDEEHAFGVIVEYAHTLDALSRLLDTVREFSPRRIITVI 182
           PLE IVRGIEEV++VP RC+LIDEE AFGVIV+YA T DALSRLLD+VRE  PRR+ITVI
Sbjct: 541 PLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYASTPDALSRLLDSVRELGPRRVITVI 600

Query: 183 GCGGDRDRGKRPMMAKIATNKSDVTMLKSNNPRTEDP 293
           GC G+ DRGKRP+M KIAT+KS+VTML S+NP++EDP
Sbjct: 601 GCCGEGDRGKRPVMTKIATDKSEVTMLTSDNPKSEDP 637


>ref|XP_002509812.1| UDP-n-acetylmuramoylalanyl-d-glutamate--2,6-diaminopimelate ligase,
           putative [Ricinus communis] gi|223549711|gb|EEF51199.1|
           UDP-n-acetylmuramoylalanyl-d-glutamate--2,
           6-diaminopimelate ligase, putative [Ricinus communis]
          Length = 780

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/97 (74%), Positives = 84/97 (86%)
 Frame = +3

Query: 3   PLEGIVRGIEEVNSVPERCQLIDEEHAFGVIVEYAHTLDALSRLLDTVREFSPRRIITVI 182
           PLE IVRGIEEV++VP RC+LIDEE AFGVIV+YAHT D LS LLD+VRE  P+RIITVI
Sbjct: 568 PLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYAHTPDGLSILLDSVRELKPKRIITVI 627

Query: 183 GCGGDRDRGKRPMMAKIATNKSDVTMLKSNNPRTEDP 293
           GC G+ DRGKRPMM K+AT+KS+VTML S+NP+ EDP
Sbjct: 628 GCAGEGDRGKRPMMTKVATDKSEVTMLTSDNPKNEDP 664


>ref|XP_003524456.1| PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
           6-diaminopimelate ligase-like [Glycine max]
          Length = 748

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/97 (75%), Positives = 85/97 (87%)
 Frame = +3

Query: 3   PLEGIVRGIEEVNSVPERCQLIDEEHAFGVIVEYAHTLDALSRLLDTVREFSPRRIITVI 182
           PLE IVRGIEEV++VP RC+LIDEE AFGVIV+YA T DALSRLLD+VRE  PRR+ITVI
Sbjct: 539 PLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYASTPDALSRLLDSVRELGPRRVITVI 598

Query: 183 GCGGDRDRGKRPMMAKIATNKSDVTMLKSNNPRTEDP 293
           GC G+ DRGKRP+M KIAT+KS+VTML S+NP+ EDP
Sbjct: 599 GCCGEGDRGKRPVMTKIATDKSEVTMLTSDNPKNEDP 635


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