BLASTX nr result

ID: Coptis24_contig00022117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022117
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago ...   225   1e-56
ref|XP_003620785.1| hypothetical protein MTR_6g090420 [Medicago ...   211   3e-52
ref|XP_003620776.1| hypothetical protein MTR_6g090300 [Medicago ...   211   3e-52
gb|ABN05744.1| hypothetical protein MtrDRAFT_AC148775g4v2 [Medic...   184   4e-44
ref|XP_003593688.1| hypothetical protein MTR_2g015020 [Medicago ...   180   4e-43

>ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago truncatula]
           gi|355486480|gb|AES67683.1| hypothetical protein
           MTR_2g097990 [Medicago truncatula]
          Length = 289

 Score =  225 bits (573), Expect = 1e-56
 Identities = 123/262 (46%), Positives = 160/262 (61%), Gaps = 5/262 (1%)
 Frame = -1

Query: 850 LQLCIPDVDLNTLSSDVSSPSKPQHVLAEAYFGMIISD----FELSAHQTAIVDCLRSEH 683
           L   IP  D++  ++  + P K QH+LA A F   + D    F+++  Q AI +CL++ H
Sbjct: 12  LHSTIPYFDVSIFTNKDTVPPKTQHILASALFSKSVQDMEVKFDMTTGQKAIFECLQAAH 71

Query: 682 AKDFLLIIPMEGLGQRMSPIEYRAILHYRLMIPLYTDGNRCLMCKRSCMHLETMQLNICR 503
           A++FLL IP++GLGQ MSP+EYR IL YRLMIPL+     C +C++SC+         C+
Sbjct: 72  AQNFLLAIPIDGLGQHMSPVEYRTILRYRLMIPLFPIDEVCSVCRKSCLDTFGEHAIHCK 131

Query: 502 YFPGFKYRXXXXXXXXXXXXXHAGTQMKKEVLVNFLTT-LERVCRSTLRLADVLIYNWFE 326
             PGFKYR              AG  +KKE  VNFLT  L+R  RSTLR ADV++Y W  
Sbjct: 132 ELPGFKYRRDFVRDVLFDIFIRAGISVKKEAPVNFLTDPLDR--RSTLRPADVMVYRWVG 189

Query: 325 GKHACVDVTGVSPMVGFGNGDFCVGVAGNSAAITKVEKHEAACVVNQQCFPPFAFDTFGF 146
           GKHACVD+T +S +VG G G F VG A   AA +KV KHE AC  NQ  F PFAFDTFGF
Sbjct: 190 GKHACVDLTEISRLVGLGVGPFIVGQAALKAASSKVVKHEKACSDNQHAFIPFAFDTFGF 249

Query: 145 *RQKRLSCSETVQKVIDNNVIT 80
              + +     VQKV+ NNV++
Sbjct: 250 LAPEAVDLLHRVQKVMHNNVMS 271


>ref|XP_003620785.1| hypothetical protein MTR_6g090420 [Medicago truncatula]
           gi|355495800|gb|AES77003.1| hypothetical protein
           MTR_6g090420 [Medicago truncatula]
          Length = 361

 Score =  211 bits (536), Expect = 3e-52
 Identities = 125/292 (42%), Positives = 165/292 (56%), Gaps = 18/292 (6%)
 Frame = -1

Query: 859 LNVLQLCIPDVDLNTLSSDVSSPSKPQHVLAEAYFGMIISD----FELSAHQTAIVDCLR 692
           L+ L   IPD D+N+ +   + P K QHVLA A F  I+ D    F+++A Q  +  CL 
Sbjct: 53  LDGLHGAIPDFDVNSFTCKDTVPPKAQHVLASALFSKIVQDMEVKFDMTARQKEVFGCLE 112

Query: 691 SEHAKDFLLIIPMEGLGQRMSPIEYRAILHYRLMIPLYTDGNRCLMCKRSCMHLETMQLN 512
           + HA+DF+L IP++GL Q MSP+EYR IL Y LMIPL+     C  C+++C+      + 
Sbjct: 113 AAHAQDFILGIPIDGLCQHMSPVEYRTILRYCLMIPLFHIDEVCPTCRKTCLDTFGEHVV 172

Query: 511 ICRYFPGFKYRXXXXXXXXXXXXXHAGTQMKKEVLVNFLTT-LERVCRSTLRLADVLIYN 335
            C+   GFKY               AG  +KKE  VNFLT  L+R  RSTLR ADV++Y 
Sbjct: 173 HCKELLGFKYMQ-------------AGVSVKKETHVNFLTDPLDR--RSTLRPADVMVYG 217

Query: 334 WFEGKHACVDVTGVSPMVGFGNGDFCVGVAGNSAAITKVEKHEAACVVNQQCFPPFAFDT 155
           W  GKHACVD+ GVSP+VG G G F VG     AA +K+ KHE AC  NQ  F PFAFDT
Sbjct: 218 WAGGKHACVDLIGVSPLVGLGVGAFTVGQLALKAASSKITKHEKACSDNQHAFIPFAFDT 277

Query: 154 FGF*RQKRLSCSETVQKVIDNNVITD-------------IHKCLASQFVMRL 38
            GF     +     VQ+V+ +N+++              I K +A+Q V RL
Sbjct: 278 LGFLASDDVDLLHRVQRVMHSNIMSHRSMNVVFTRIDFAIQKGIAAQIVARL 329


>ref|XP_003620776.1| hypothetical protein MTR_6g090300 [Medicago truncatula]
           gi|355495791|gb|AES76994.1| hypothetical protein
           MTR_6g090300 [Medicago truncatula]
          Length = 347

 Score =  211 bits (536), Expect = 3e-52
 Identities = 125/292 (42%), Positives = 165/292 (56%), Gaps = 18/292 (6%)
 Frame = -1

Query: 859 LNVLQLCIPDVDLNTLSSDVSSPSKPQHVLAEAYFGMIISD----FELSAHQTAIVDCLR 692
           L+ L   IPD D+N+ +   + P K QHVLA A F  I+ D    F+++A Q  +  CL 
Sbjct: 53  LDGLHGAIPDFDVNSFTCKDTVPPKAQHVLASALFSKIVQDMEVKFDMTARQKEVFGCLE 112

Query: 691 SEHAKDFLLIIPMEGLGQRMSPIEYRAILHYRLMIPLYTDGNRCLMCKRSCMHLETMQLN 512
           + HA+DF+L IP++GL Q MSP+EYR IL Y LMIPL+     C  C+++C+      + 
Sbjct: 113 AAHAQDFILGIPIDGLCQHMSPVEYRTILRYCLMIPLFHIDEVCPTCRKTCLDTFGEHVV 172

Query: 511 ICRYFPGFKYRXXXXXXXXXXXXXHAGTQMKKEVLVNFLTT-LERVCRSTLRLADVLIYN 335
            C+   GFKY               AG  +KKE  VNFLT  L+R  RSTLR ADV++Y 
Sbjct: 173 HCKELLGFKYMQ-------------AGVSVKKETHVNFLTDPLDR--RSTLRPADVMVYG 217

Query: 334 WFEGKHACVDVTGVSPMVGFGNGDFCVGVAGNSAAITKVEKHEAACVVNQQCFPPFAFDT 155
           W  GKHACVD+ GVSP+VG G G F VG     AA +K+ KHE AC  NQ  F PFAFDT
Sbjct: 218 WAGGKHACVDLIGVSPLVGLGVGAFTVGQLALKAASSKITKHEKACSDNQHAFIPFAFDT 277

Query: 154 FGF*RQKRLSCSETVQKVIDNNVITD-------------IHKCLASQFVMRL 38
            GF     +     VQ+V+ +N+++              I K +A+Q V RL
Sbjct: 278 LGFLASDDVDLLHRVQRVMHSNIMSHRSMNVVFTRIDFAIQKGIAAQIVARL 329


>gb|ABN05744.1| hypothetical protein MtrDRAFT_AC148775g4v2 [Medicago truncatula]
          Length = 203

 Score =  184 bits (466), Expect = 4e-44
 Identities = 98/198 (49%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
 Frame = -1

Query: 736 FELSAHQTAIVDCLRSEHAKDFLLIIPMEGLGQRMSPIEYRAILHYRLMIPLYTDGNRCL 557
           F+++  Q  I  CL+  HA+DFLL IP++GLG+ MS +EYR IL YRLM PL+     C 
Sbjct: 5   FDMTTRQKTIFGCLQEPHAQDFLLAIPIDGLGRHMSLVEYRTILRYRLMNPLFPIDEVCP 64

Query: 556 MCKRSCMHLETMQLNICRYFPGFKYRXXXXXXXXXXXXXHAGTQMKKEVLVNFLT-TLER 380
           +C+++C+      +  C+  PGFKYR              AG  +KKE  VNFLT  LER
Sbjct: 65  VCRKACLDTFGEHVVHCKELPGFKYRHDFVRDVLFDIFRRAGVSVKKEAPVNFLTDPLER 124

Query: 379 VCRSTLRLADVLIYNWFEGKHACVDVTGVSPMVGFGNGDFCVGVAGNSAAITKVEKHEAA 200
             RSTLR ADV++Y W  GKHACVD+TGVS +VG G   F VG     AA +KV KHE  
Sbjct: 125 --RSTLRHADVMVYGWVGGKHACVDLTGVSQLVGLGVRPFTVGKPVLKAASSKVAKHEKT 182

Query: 199 CVVNQQCFPPFAFDTFGF 146
           C  NQ  F PFAFDTF F
Sbjct: 183 CFHNQHAFIPFAFDTFSF 200


>ref|XP_003593688.1| hypothetical protein MTR_2g015020 [Medicago truncatula]
           gi|355482736|gb|AES63939.1| hypothetical protein
           MTR_2g015020 [Medicago truncatula]
          Length = 239

 Score =  180 bits (457), Expect = 4e-43
 Identities = 107/236 (45%), Positives = 136/236 (57%), Gaps = 14/236 (5%)
 Frame = -1

Query: 697 LRSEHAKDFLLIIPMEGLGQRMSPIEYRAILHYRLMIPLYTDGNRCLMCKRSCMHLETMQ 518
           +++ HA+DFLL IP++ LGQ MSP+EYR IL YRLMIPL+     CL+ +++C+      
Sbjct: 3   VQATHAQDFLLAIPIDELGQHMSPVEYRTILRYRLMIPLFPIDEVCLVGRKACLDTFGEH 62

Query: 517 LNICRYFPGFKYRXXXXXXXXXXXXXHAGTQMKKEVLVNFLTT-LERVCRSTLRLADVLI 341
           +  C+   GFK R              AG  +KKE  VNFLT  L+R  RSTLR ADV++
Sbjct: 63  VVHCKELSGFKCRHDFVRDVLFDIFKRAGISVKKEAPVNFLTDPLDR--RSTLRPADVMV 120

Query: 340 YNWFEGKHACVDVTGVSPMVGFGNGDFCVGVAGNSAAITKVEKHEAACVVNQQCFPPFAF 161
           Y W  GKHACVD+TGVSP+VG     F VG A   A  +KV KHE AC  NQ  F PFAF
Sbjct: 121 YGWVGGKHACVDLTGVSPLVGLSVRPFTVGQATLKAVSSKVAKHEKACSDNQHAFIPFAF 180

Query: 160 DTFGF*RQKRLSCSETVQKVIDNNVITD-------------IHKCLASQFVMRLTS 32
           DTFGF   + +     VQKV+ + V++              I K LA+Q V  L S
Sbjct: 181 DTFGFLAPEIVDLLHRVQKVMHSKVMSPRSMNVVFMRIDFAIQKGLAAQLVAHLPS 236


Top