BLASTX nr result

ID: Coptis24_contig00022104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022104
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143807.1| PREDICTED: serine/threonine-protein phosphat...    64   1e-11
gb|ABD33070.2| IMP dehydrogenase/GMP reductase, putative [Medica...    64   1e-11
ref|XP_003603347.1| Protease inhibitor [Medicago truncatula] gi|...    62   7e-11
ref|XP_002329050.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
ref|XP_003633227.1| PREDICTED: serine/threonine-protein phosphat...    70   4e-10

>ref|XP_004143807.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
           [Cucumis sativus]
          Length = 486

 Score = 64.3 bits (155), Expect(2) = 1e-11
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -2

Query: 720 LKCHGHLNKLVQWDIVGECSDCSNFHVEL-QRTDLCALVLGVYRYQDPVLISAFVERWHP 544
           L+C  H + L +W + G+        +EL ++     L L      D  LISA VERW  
Sbjct: 35  LRCLEHTSILERWKLTGK-------QIELVEKAGFGYLRLMPAVTLDCALISALVERWRK 87

Query: 543 ETNTFHMPFGEMTVTLDDVSQILGVAIRGRAV 448
           ETNTFH   GEMT+TL+DV+ +LG++I G+ V
Sbjct: 88  ETNTFHFSVGEMTITLEDVALLLGLSIDGKPV 119



 Score = 31.2 bits (69), Expect(2) = 1e-11
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = -1

Query: 358 GRDPVRFKGKALEFL*S*FVGKVCDKGQGVTGKVSTLTEVQRAVRAFILFFFGCAVFTDK 179
           G+ P  FKG A++      V   C +  G+        +++ + RA++L+  G  +F   
Sbjct: 135 GKAPTDFKG-AVKLTWLKEVFSECPEDAGIE-------QIEYSTRAYLLYLLGSTIFAST 186

Query: 178 SGTGVPICYLT 146
           SG  V + YL+
Sbjct: 187 SGNKVSVMYLS 197


>gb|ABD33070.2| IMP dehydrogenase/GMP reductase, putative [Medicago truncatula]
          Length = 663

 Score = 64.3 bits (155), Expect(2) = 1e-11
 Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
 Frame = -2

Query: 636 LQRTDLCALVLGVYRYQDPVLISAFVERWHPETNTFHMPFGEMTVTLDDVSQILGVAIRG 457
           L+++ L  LV   Y      L+    ERWHPET+TFHMP  EMTVTLDDV+ +  ++I G
Sbjct: 167 LRQSGLHDLVYLGYSTVPHALLMTLCERWHPETSTFHMPMEEMTVTLDDVACLTHLSIEG 226

Query: 456 RAVRGNXXXXXXXXXXXLQRALGVSEPVIKKEMG--VTRFVSKVRRWNSYRASLLGRS 289
           R +              L R LGVS+   +K  G     ++S +R  + Y  + LGR+
Sbjct: 227 RMLSHGKKMSKHEGAELLMRHLGVSQQEAEKICGQEYGGYISYLRLRDFY-TTYLGRA 283



 Score = 30.8 bits (68), Expect(2) = 1e-11
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 229 VRAFILFFFGCAVFTDKSGTGVPICYLTKL 140
           VR ++L+  GC +F D+S   + + YLT +
Sbjct: 306 VRCYLLYLVGCLLFGDRSNKRIELVYLTTM 335


>ref|XP_003603347.1| Protease inhibitor [Medicago truncatula]
           gi|355492395|gb|AES73598.1| Protease inhibitor [Medicago
           truncatula]
          Length = 924

 Score = 61.6 bits (148), Expect(2) = 7e-11
 Identities = 34/77 (44%), Positives = 41/77 (53%)
 Frame = -2

Query: 612 LVLGVYRYQDPVLISAFVERWHPETNTFHMPFGEMTVTLDDVSQILGVAIRGRAVRGNXX 433
           LV   Y      L+    ERWHPET+TFH+P GEMTVTLDDV+ +  + I GR +     
Sbjct: 545 LVYLCYTIVPHALLMTLCERWHPETSTFHVPLGEMTVTLDDVACLTHLQIEGRMLSHGKK 604

Query: 432 XXXXXXXXXLQRALGVS 382
                    L R LGVS
Sbjct: 605 MPKHEGAALLMRHLGVS 621



 Score = 31.2 bits (69), Expect(2) = 7e-11
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = -1

Query: 268 TGKVSTLTEVQRA----VRAFILFFFGCAVFTDKSGTGVPICYLTKL 140
           T     + E+QR     V++++L+  GC +F D+S   + + YLT +
Sbjct: 645 TEDAEEMKELQRVRTFCVKSYLLYLIGCLLFGDRSNKCIELVYLTTM 691


>ref|XP_002329050.1| predicted protein [Populus trichocarpa] gi|222839721|gb|EEE78044.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -2

Query: 720 LKCHGHLNKLVQWDIVG---ECSDCSNFHVELQRTDLCALVLGVYRYQDPVLISAFVERW 550
           L+CH H +KL +W + G   E  + + F    ++ +  +L        D  LISA VERW
Sbjct: 56  LRCHEHTSKLEEWKLTGKQLELVEKAGFKY-FRKIEAFSL--------DNQLISALVERW 106

Query: 549 HPETNTFHMPFGEMTVTLDDVSQILGVAIRGRAV 448
             ETNTFH+P GEMT+TLD+V+  LG+AI G  V
Sbjct: 107 RKETNTFHLPGGEMTITLDEVALNLGLAIDGEPV 140


>ref|XP_003633227.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
           [Vitis vinifera]
          Length = 659

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 41/93 (44%), Positives = 53/93 (56%)
 Frame = -2

Query: 720 LKCHGHLNKLVQWDIVGECSDCSNFHVELQRTDLCALVLGVYRYQDPVLISAFVERWHPE 541
           L+CH H +KL QW +  +  +       + +     L L      D  LISA VERW  E
Sbjct: 36  LRCHEHTSKLDQWALTPKQLEL------VHKAGFGYLRLIPAISLDNPLISALVERWRRE 89

Query: 540 TNTFHMPFGEMTVTLDDVSQILGVAIRGRAVRG 442
           TNTFH+  GEMTVTL+DV+ +LG+AI G  V G
Sbjct: 90  TNTFHLNVGEMTVTLEDVAYLLGLAIDGEPVMG 122


Top