BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022067
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB28725.2| flavin-type blue-light photoreceptor [Arabidopsis...   119   5e-25
gb|AAD17364.1| Arabidopsis thaliana flavin-type blue-light photo...   119   5e-25
pdb|1U3C|A Chain A, Crystal Structure Of The Phr Domain Of Crypt...   119   5e-25
gb|AAB28724.1| flavin-type blue-light photoreceptor [Arabidopsis...   119   5e-25
prf||1924377A blue light photoreceptor                                119   5e-25

>gb|AAB28725.2| flavin-type blue-light photoreceptor [Arabidopsis thaliana]
          Length = 556

 Score =  119 bits (297), Expect = 5e-25
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +3

Query: 159 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWL 335
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWL
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWL 63



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +1

Query: 472 TSFITKRSTDSISSLIQVVKDTGATRLFFNHLYD 573
           T  ITKRSTDS++SL+ VVK TGA+++FFNHLYD
Sbjct: 79  TCLITKRSTDSVASLLDVVKSTGASQIFFNHLYD 112


>gb|AAD17364.1| Arabidopsis thaliana flavin-type blue-light photoreceptor
           (SW:Q43125) (Pfam: PF00875, Score=765.2, E=2.6e-226,
           N=1) [Arabidopsis thaliana]
          Length = 702

 Score =  119 bits (297), Expect = 5e-25
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +3

Query: 159 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWL 335
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWL
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWL 63



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +1

Query: 472 TSFITKRSTDSISSLIQVVKDTGATRLFFNHLYD 573
           T  ITKRSTDS++SL+ VVK TGA+++FFNHLYD
Sbjct: 79  TCLITKRSTDSVASLLDVVKSTGASQIFFNHLYD 112


>pdb|1U3C|A Chain A, Crystal Structure Of The Phr Domain Of Cryptochrome 1 From
           Arabidopsis Thaliana gi|52695978|pdb|1U3D|A Chain A,
           Crystal Structure Of The Phr Domain Of Cryptochrome 1
           From Arabidopsis Thaliana With Amppnp Bound
          Length = 509

 Score =  119 bits (297), Expect = 5e-25
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +3

Query: 159 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWL 335
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWL
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWL 63



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +1

Query: 472 TSFITKRSTDSISSLIQVVKDTGATRLFFNHLYD 573
           T  ITKRSTDS++SL+ VVK TGA+++FFNHLYD
Sbjct: 79  TCLITKRSTDSVASLLDVVKSTGASQIFFNHLYD 112


>gb|AAB28724.1| flavin-type blue-light photoreceptor [Arabidopsis thaliana]
          Length = 681

 Score =  119 bits (297), Expect = 5e-25
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +3

Query: 159 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWL 335
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWL
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWL 63



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +1

Query: 472 TSFITKRSTDSISSLIQVVKDTGATRLFFNHLYD 573
           T  ITKRSTDS++SL+ VVK TGA+++FFNHLYD
Sbjct: 79  TCLITKRSTDSVASLLDVVKSTGASQIFFNHLYD 112


>prf||1924377A blue light photoreceptor
          Length = 681

 Score =  119 bits (297), Expect = 5e-25
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +3

Query: 159 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWL 335
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWL
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWL 63



 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = +1

Query: 472 TSFITKRSTDSISSLIQVVKDTGATRLFFNHLYD 573
           T  ITKRSTDS++SL+ VVK TGA+++FFNHLYD
Sbjct: 79  TCLITKRSTDSVASLLDVVKSTGASQIFFNHLYD 112