BLASTX nr result

ID: Coptis24_contig00022037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022037
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164800.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   219   2e-55
ref|XP_004136487.1| PREDICTED: ABC transporter B family member 1...   219   2e-55
emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera]   217   7e-55
ref|XP_002279471.2| PREDICTED: ABC transporter B family member 1...   217   9e-55
ref|XP_002510564.1| multidrug resistance protein 1, 2, putative ...   215   3e-54

>ref|XP_004164800.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
            13-like [Cucumis sativus]
          Length = 1248

 Score =  219 bits (558), Expect = 2e-55
 Identities = 111/152 (73%), Positives = 133/152 (87%)
 Frame = -1

Query: 458  GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
            GDIMKSFMVL+IT+L+IAETLAL P+I+KGSQAL  VF+IL R+T ID N+ ++E +T I
Sbjct: 938  GDIMKSFMVLIITSLAIAETLALTPDIVKGSQALGSVFNILHRKTIIDSNNPSAEMVTNI 997

Query: 278  EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
             GD+EF NVSF YP  PD++VF+DLNLRVSAG +LA+VG SGSGKS+VIAL+MRFYDP S
Sbjct: 998  IGDIEFNNVSFKYPARPDITVFEDLNLRVSAGKSLAVVGQSGSGKSTVIALVMRFYDPIS 1057

Query: 98   GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
            G+ILIDGR I+ LNLRSLR+KIGLVQQEPALF
Sbjct: 1058 GTILIDGRDIKSLNLRSLRMKIGLVQQEPALF 1089



 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/152 (36%), Positives = 93/152 (61%)
 Frame = -1

Query: 458 GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
           G    + + ++ +  ++ + +     I KG  A   +FS+++         +    ++ +
Sbjct: 305 GKAFTTIINVIFSGFALGQAMPNLAAIAKGRVAAANIFSMIDADYESSSRSNNGVALSSV 364

Query: 278 EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
            G +EF  VSF+YP  P + +F  L+  +SAG  +A+VGPSGSGKS++++++ RFY+P+S
Sbjct: 365 AGKIEFSEVSFAYPSRPQL-IFDKLSFSISAGRTVAVVGPSGSGKSTIVSMVQRFYEPSS 423

Query: 98  GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
           G IL+DG  +R L L+ LR ++GLV QEPALF
Sbjct: 424 GKILLDGHDLRTLELKWLRRQMGLVSQEPALF 455


>ref|XP_004136487.1| PREDICTED: ABC transporter B family member 13-like [Cucumis sativus]
          Length = 1281

 Score =  219 bits (558), Expect = 2e-55
 Identities = 111/152 (73%), Positives = 133/152 (87%)
 Frame = -1

Query: 458  GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
            GDIMKSFMVL+IT+L+IAETLAL P+I+KGSQAL  VF+IL R+T ID N+ ++E +T I
Sbjct: 971  GDIMKSFMVLIITSLAIAETLALTPDIVKGSQALGSVFNILHRKTIIDSNNPSAEMVTNI 1030

Query: 278  EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
             GD+EF NVSF YP  PD++VF+DLNLRVSAG +LA+VG SGSGKS+VIAL+MRFYDP S
Sbjct: 1031 IGDIEFNNVSFKYPARPDITVFEDLNLRVSAGKSLAVVGQSGSGKSTVIALVMRFYDPIS 1090

Query: 98   GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
            G+ILIDGR I+ LNLRSLR+KIGLVQQEPALF
Sbjct: 1091 GTILIDGRDIKSLNLRSLRMKIGLVQQEPALF 1122



 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/152 (36%), Positives = 93/152 (61%)
 Frame = -1

Query: 458 GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
           G    + + ++ +  ++ + +     I KG  A   +FS+++         +    ++ +
Sbjct: 338 GKAFTTIINVIFSGFALGQAMPNLAAIAKGRVAAANIFSMIDADYESSSRSNNGVALSSV 397

Query: 278 EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
            G +EF  VSF+YP  P + +F  L+  +SAG  +A+VGPSGSGKS++++++ RFY+P+S
Sbjct: 398 AGKIEFSEVSFAYPSRPQL-IFDKLSFSISAGRTVAVVGPSGSGKSTIVSMVQRFYEPSS 456

Query: 98  GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
           G IL+DG  +R L L+ LR ++GLV QEPALF
Sbjct: 457 GKILLDGHDLRTLELKWLRRQMGLVSQEPALF 488


>emb|CAN71068.1| hypothetical protein VITISV_031708 [Vitis vinifera]
          Length = 1344

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/152 (70%), Positives = 135/152 (88%)
 Frame = -1

Query: 458  GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
            GDI+KSFMVL+ITA S+AETLAL P+I+KGSQAL  VFSIL+R+TAI+ +  TS  +T+I
Sbjct: 1035 GDIIKSFMVLIITAFSVAETLALTPDIVKGSQALGSVFSILQRKTAINRDXPTSSVVTDI 1094

Query: 278  EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
            +GD+EFRNVSF YP  PD+++FKDLNL++SAG +LA+VG SGSGKS+VI+L+MRFYDPTS
Sbjct: 1095 QGDIEFRNVSFRYPARPDLTIFKDLNLKISAGKSLAIVGQSGSGKSTVISLVMRFYDPTS 1154

Query: 98   GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
            G+++IDG  I+ LNLRSLR+KIGLVQQEPALF
Sbjct: 1155 GAVMIDGFDIKGLNLRSLRMKIGLVQQEPALF 1186



 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/152 (36%), Positives = 90/152 (59%)
 Frame = -1

Query: 458 GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
           G    + + ++ +  ++ +       I KG  A   + +++E  +           + ++
Sbjct: 400 GKAFTTILNVIFSGFALGQAAPNLAAIAKGRAAAANIVNMIETDSTASKRLDNGIMLPKV 459

Query: 278 EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
            G +EF  V F+YP  P + VF++L+  + AG   A+VGPSGSGKS++I+++ RFY+PTS
Sbjct: 460 AGQLEFCEVCFAYPSRPSM-VFENLSFSIYAGKTFAVVGPSGSGKSTIISMVQRFYEPTS 518

Query: 98  GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
           G IL+DG  I+ L L+ LR ++GLV QEPALF
Sbjct: 519 GKILLDGHDIKNLRLKWLRAQMGLVSQEPALF 550


>ref|XP_002279471.2| PREDICTED: ABC transporter B family member 13-like [Vitis vinifera]
          Length = 1254

 Score =  217 bits (552), Expect = 9e-55
 Identities = 107/152 (70%), Positives = 135/152 (88%)
 Frame = -1

Query: 458  GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
            GDI+KSFMVL+ITA S+AETLAL P+I+KGSQAL  VFSIL+R+TAI+ ++ TS  +T+I
Sbjct: 945  GDIIKSFMVLIITAFSVAETLALTPDIVKGSQALGSVFSILQRKTAINRDNPTSSVVTDI 1004

Query: 278  EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
            +GD+EFRNVSF YP  PD+ +FKDLNL++SAG +LA+VG SGSGKS+VI+L+MRFYDPTS
Sbjct: 1005 QGDIEFRNVSFRYPARPDLIIFKDLNLKISAGKSLAIVGQSGSGKSTVISLVMRFYDPTS 1064

Query: 98   GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
            G+++IDG  I+ LNLRSLR+KIGLVQQEPALF
Sbjct: 1065 GAVMIDGFDIKGLNLRSLRMKIGLVQQEPALF 1096



 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/152 (36%), Positives = 90/152 (59%)
 Frame = -1

Query: 458 GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
           G    + + ++ +  ++ +       I KG  A   + +++E  +           + ++
Sbjct: 310 GKAFTTILNVIFSGFALGQAAPNLAAIAKGRAAAANIVNMIETDSTASKRLDNGIMLPKV 369

Query: 278 EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
            G +EF  V F+YP  P + VF++L+  + AG   A+VGPSGSGKS++I+++ RFY+PTS
Sbjct: 370 AGQLEFCEVCFAYPSRPSM-VFENLSFSIYAGKTFAVVGPSGSGKSTIISMVQRFYEPTS 428

Query: 98  GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
           G IL+DG  I+ L L+ LR ++GLV QEPALF
Sbjct: 429 GKILLDGHDIKNLRLKWLRAQMGLVSQEPALF 460


>ref|XP_002510564.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223551265|gb|EEF52751.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1252

 Score =  215 bits (548), Expect = 3e-54
 Identities = 105/152 (69%), Positives = 134/152 (88%)
 Frame = -1

Query: 458  GDIMKSFMVLVITALSIAETLALAPNILKGSQALRPVFSILERRTAIDPNDSTSEGITEI 279
            G+IMKSFMVL+ITAL+IAETLAL P+I+KG+QAL PVFSIL R+TAIDP + TS+ + +I
Sbjct: 943  GNIMKSFMVLIITALAIAETLALTPDIVKGTQALAPVFSILHRKTAIDPENPTSKMVADI 1002

Query: 278  EGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPTS 99
            +GD++FRNV+F YP  PD+++F+ LNL+V AG +LA+VG SGSGKS++IAL++RFYDP S
Sbjct: 1003 KGDIDFRNVNFKYPARPDITIFQQLNLKVPAGRSLAVVGQSGSGKSTIIALLLRFYDPIS 1062

Query: 98   GSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
            G+ILIDG  I+ LNL+SLRLKIGLVQQEPALF
Sbjct: 1063 GTILIDGCEIKTLNLKSLRLKIGLVQQEPALF 1094



 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/153 (42%), Positives = 101/153 (66%), Gaps = 5/153 (3%)
 Frame = -1

Query: 446 KSFMVLVITALSIAETLALAPN---ILKGSQALRPVFSILERRTAIDPNDSTSEGIT--E 282
           K+F +++    S        PN   I KG  A   + +++++ +   P++S+ +GI   E
Sbjct: 311 KAFTMIINVIFSGFALGQATPNLAAIAKGRAAAANIINMIKKDSC--PSNSSEDGIELPE 368

Query: 281 IEGDVEFRNVSFSYPMTPDVSVFKDLNLRVSAGSNLALVGPSGSGKSSVIALMMRFYDPT 102
           ++G +EF N+ FSYP  P++ VF++L+  VSAG   A+VGPSGSGKS+VI+++ RFY+P 
Sbjct: 369 VDGKIEFCNICFSYPSRPNM-VFENLSFSVSAGKTFAVVGPSGSGKSTVISMVQRFYEPN 427

Query: 101 SGSILIDGRVIRCLNLRSLRLKIGLVQQEPALF 3
           SG IL+DG  ++ L L+ LR ++GLV QEPALF
Sbjct: 428 SGKILLDGHDLKTLRLKWLREQLGLVSQEPALF 460


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