BLASTX nr result

ID: Coptis24_contig00022034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022034
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE68427.1| hypothetical protein OsJ_26794 [Oryza sativa Japo...    79   4e-13
ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [S...    79   5e-13
ref|XP_003632266.1| PREDICTED: uncharacterized protein LOC100854...    77   1e-12
emb|CAN70085.1| hypothetical protein VITISV_003006 [Vitis vinifera]    77   1e-12
ref|NP_001046945.2| Os02g0513700 [Oryza sativa Japonica Group] g...    75   7e-12

>gb|EEE68427.1| hypothetical protein OsJ_26794 [Oryza sativa Japonica Group]
          Length = 368

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/77 (54%), Positives = 48/77 (62%)
 Frame = +2

Query: 107 FKVNARNDVTAMIGSFFYANGIPFNVARSPFWFDMVRAINEAPKGYKPPSSEKIRTTLLD 286
           F    R+D    I  F  ANGIPFN+ RSP + +MV AIN+AP GYK PSSEK RTTLLD
Sbjct: 160 FGEGKRHDADMKIVKFLCANGIPFNILRSPQFAEMVTAINKAPSGYKGPSSEKARTTLLD 219

Query: 287 KEKYKVEKALMPLKEQW 337
             K  VE  L  +K  W
Sbjct: 220 ACKRSVEHDLAIVKSTW 236


>ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [Sorghum bicolor]
           gi|241936281|gb|EES09426.1| hypothetical protein
           SORBIDRAFT_05g005485 [Sorghum bicolor]
          Length = 313

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/84 (50%), Positives = 51/84 (60%)
 Frame = +2

Query: 86  SSSILGLFKVNARNDVTAMIGSFFYANGIPFNVARSPFWFDMVRAINEAPKGYKPPSSEK 265
           ++S+   F    R+ V   I  F  ANGI FNV RSP + +MV AIN APKGYK P SEK
Sbjct: 145 NNSLAQAFGAAERDAVDLKIMQFIAANGISFNVLRSPHYSEMVTAINNAPKGYKGPGSEK 204

Query: 266 IRTTLLDKEKYKVEKALMPLKEQW 337
            RTTLLD  K  VE  L  +++ W
Sbjct: 205 ARTTLLDALKRNVENDLSTVRDTW 228


>ref|XP_003632266.1| PREDICTED: uncharacterized protein LOC100854857 [Vitis vinifera]
          Length = 635

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/88 (37%), Positives = 56/88 (63%)
 Frame = +2

Query: 74  VGNTSSSILGLFKVNARNDVTAMIGSFFYANGIPFNVARSPFWFDMVRAINEAPKGYKPP 253
           +  +  S+  ++K  A+ DV  ++  FFYA+G+ FN+  SP++ +M +AI     GY+PP
Sbjct: 95  IRTSQPSVTCVWKTIAKEDVDDIVARFFYADGLDFNIVNSPYFLEMTKAIAAFGPGYEPP 154

Query: 254 SSEKIRTTLLDKEKYKVEKALMPLKEQW 337
           ++EK+    L KEK K+EKA+  ++E W
Sbjct: 155 TTEKLSDLFLSKEKAKIEKAMALVRESW 182


>emb|CAN70085.1| hypothetical protein VITISV_003006 [Vitis vinifera]
          Length = 635

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/88 (37%), Positives = 56/88 (63%)
 Frame = +2

Query: 74  VGNTSSSILGLFKVNARNDVTAMIGSFFYANGIPFNVARSPFWFDMVRAINEAPKGYKPP 253
           +  +  S+  ++K  A+ DV  ++  FFYA+G+ FN+  SP++ +M +AI     GY+PP
Sbjct: 95  IRTSQPSVTCVWKTIAKEDVDDIVARFFYADGLDFNIVNSPYFLEMTKAIAAFGPGYEPP 154

Query: 254 SSEKIRTTLLDKEKYKVEKALMPLKEQW 337
           ++EK+    L KEK K+EKA+  ++E W
Sbjct: 155 TTEKLSDLFLSKEKAKIEKAMALVRESW 182


>ref|NP_001046945.2| Os02g0513700 [Oryza sativa Japonica Group]
           gi|255670935|dbj|BAF08859.2| Os02g0513700 [Oryza sativa
           Japonica Group]
          Length = 675

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
 Frame = +2

Query: 89  SSILGLFKVNARNDVTAMIGSFFYANGIPFNVARSPFWFD-MVRAINEAPKGYKPPSSEK 265
           S+I   F  + R+++ A+I   FY  GIPFNVAR+P++    + A N A  GY PPS  K
Sbjct: 157 SAIESSFNSDTRSNLDALIARMFYTAGIPFNVARNPYFRKAFMFACNNALGGYSPPSYNK 216

Query: 266 IRTTLLDKEKYKVEKALMPLKEQW 337
           +RTTLL +EK  VE+ L PLK  W
Sbjct: 217 LRTTLLVQEKTHVERLLNPLKSTW 240


Top