BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022023
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...    96   4e-24
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]    92   7e-23
emb|CBI28700.3| unnamed protein product [Vitis vinifera]               92   7e-23
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...    92   7e-23
ref|XP_002300839.1| f-box family protein [Populus trichocarpa] g...    90   3e-22

>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score = 96.3 bits (238), Expect(2) = 4e-24
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = +2

Query: 212 LKLAKKLQRKRFSKHNSMAWVLPPDLTIKVFSLLDTQSLCYASATCSMFNKCAMDP 379
           L+   +  RKR SKHNS+ WVLPPDLTIKVFS+LDTQSLCYA+ATCSMF+KCAMDP
Sbjct: 84  LEAGNRSSRKRSSKHNSLTWVLPPDLTIKVFSMLDTQSLCYAAATCSMFHKCAMDP 139



 Score = 40.0 bits (92), Expect(2) = 4e-24
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 55  MESFLETFLGLFNNNNDTSSIDESLERLIEMKTNDCDQNQLIESALELGSV 207
           ++  L+TFL L ++   + SID SLE L+E    D DQ+ LI+ AL+LGS+
Sbjct: 34  VDGLLQTFLDLADS--PSLSIDLSLEHLLESSPCDSDQSVLIDRALKLGSI 82


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score = 91.7 bits (226), Expect(2) = 7e-23
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 212 LKLAKKLQRKRFSKHNSMAWVLPPDLTIKVFSLLDTQSLCYASATCSMFNKCAMDP 379
           L+  K+  RKR S HNS+ W LPPDLTIKVFS+LDTQSLCY +ATCSMF+KCAMDP
Sbjct: 90  LEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFHKCAMDP 145



 Score = 40.4 bits (93), Expect(2) = 7e-23
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 31  PPKTEEKNMESFLETFLGLFNNNNDTSSIDESLERLIEMKTNDCDQNQLIESALELGS 204
           P  ++   ME  LE FL L +++    S+  S E+L++ +  D DQN LI+ AL LGS
Sbjct: 32  PRVSQSDQMEGLLEAFLELSDSSGP--SLHLSFEKLLDSRACDSDQNLLIDRALRLGS 87


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 91.7 bits (226), Expect(2) = 7e-23
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 212 LKLAKKLQRKRFSKHNSMAWVLPPDLTIKVFSLLDTQSLCYASATCSMFNKCAMDP 379
           L+  K+  RKR S HNS+ W LPPDLTIKVFS+LDTQSLCY +ATCSMF+KCAMDP
Sbjct: 90  LEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFHKCAMDP 145



 Score = 40.4 bits (93), Expect(2) = 7e-23
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 31  PPKTEEKNMESFLETFLGLFNNNNDTSSIDESLERLIEMKTNDCDQNQLIESALELGS 204
           P  ++   ME  LE FL L +++    S+  S E+L++ +  D DQN LI+ AL LGS
Sbjct: 32  PRVSQSDQMEGLLEAFLELSDSSGP--SLHLSFEKLLDSRACDSDQNLLIDRALRLGS 87


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score = 91.7 bits (226), Expect(2) = 7e-23
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 212 LKLAKKLQRKRFSKHNSMAWVLPPDLTIKVFSLLDTQSLCYASATCSMFNKCAMDP 379
           L+  K+  RKR S HNS+ W LPPDLTIKVFS+LDTQSLCY +ATCSMF+KCAMDP
Sbjct: 90  LEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFHKCAMDP 145



 Score = 40.4 bits (93), Expect(2) = 7e-23
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = +1

Query: 31  PPKTEEKNMESFLETFLGLFNNNNDTSSIDESLERLIEMKTNDCDQNQLIESALELGS 204
           P  ++   ME  LE FL L +++    S+  S E+L++ +  D DQN LI+ AL LGS
Sbjct: 32  PRVSQSDQMEGLLEAFLELSDSSGP--SLHLSFEKLLDSRACDSDQNLLIDRALRLGS 87


>ref|XP_002300839.1| f-box family protein [Populus trichocarpa]
           gi|222842565|gb|EEE80112.1| f-box family protein
           [Populus trichocarpa]
          Length = 471

 Score = 90.1 bits (222), Expect(2) = 3e-22
 Identities = 41/56 (73%), Positives = 46/56 (82%)
 Frame = +2

Query: 212 LKLAKKLQRKRFSKHNSMAWVLPPDLTIKVFSLLDTQSLCYASATCSMFNKCAMDP 379
           L+  K+  RKR S HNS+ W LPPDLTIKV S+LDTQSLCYA+ATCSMF KCAMDP
Sbjct: 74  LEAGKRSARKRSSVHNSLTWALPPDLTIKVLSMLDTQSLCYAAATCSMFYKCAMDP 129



 Score = 40.0 bits (92), Expect(2) = 3e-22
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +1

Query: 28  APPKTEEKNMESFLETFLGLFNNNNDTSS--IDESLERLIEMKTNDCDQNQLIESALELG 201
           +P  +   NM + L+  L  F N  D+ S  ID S E L+E    D D++ LI+ AL+LG
Sbjct: 11  SPSPSPNPNMNNQLDNLLRTFLNLADSPSLSIDHSFEHLLESSPCDADKSLLIDRALKLG 70

Query: 202 SV 207
           S+
Sbjct: 71  SL 72