BLASTX nr result

ID: Coptis24_contig00022017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022017
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP65731.1| R2R3 MYB [Iris fulva]                                   72   5e-11
ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycin...    70   1e-10
sp|P81395.1|MYB30_ANTMA RecName: Full=Myb-related protein 330          69   3e-10
ref|NP_001235662.1| MYB transcription factor MYB56 [Glycine max]...    69   4e-10
dbj|BAJ33514.1| R2R3-MYB transcriptional factor [Dahlia pinnata]       69   5e-10

>gb|AFP65731.1| R2R3 MYB [Iris fulva]
          Length = 233

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = -2

Query: 405 TDNEIKNYWNTHIRRKLLSQGIDPKTHRRINAIASDNGGGNNSIS 271
           TDNEIKNYWNTHIRRKLLS+GIDP THR ++AI+SD+   + S S
Sbjct: 100 TDNEIKNYWNTHIRRKLLSRGIDPSTHRAVSAISSDHNNKDKSSS 144


>ref|NP_001242477.1| uncharacterized protein LOC100808083 [Glycine max]
           gi|255642080|gb|ACU21306.1| unknown [Glycine max]
          Length = 303

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 55/172 (31%), Positives = 75/172 (43%), Gaps = 37/172 (21%)
 Frame = -2

Query: 405 TDNEIKNYWNTHIRRKLLSQGIDPKTHRRINA---------------------------- 310
           TDNEIKNYWNTHI+RKL S+GIDP+THR +NA                            
Sbjct: 100 TDNEIKNYWNTHIKRKLYSRGIDPRTHRPLNASATPATTATATAVPSANSSKKINNNNNN 159

Query: 309 IASDNGGGNNSISCIPTVDSFQMAKVGKSRDDSAHNASGNRGIGEEEQ--QHQXXXXXXX 136
           I +D    NN    +    ++  AK+G +   +A +++ + G+  EE    HQ       
Sbjct: 160 IDNDINNNNNGFQLVSN-SAYANAKIGTNL-VAAEDSNSSSGVTTEESVPHHQLNLDLSI 217

Query: 135 XXXSVQSPTSTNSEEFKQK-----DSSFQTLVK--PQPVLSHNICLCCNLGL 1
              S    +S N E+ K +     D   Q L K          +CLC NLGL
Sbjct: 218 GLPSQPQGSSLNPEKLKPEPQEHDDQKPQVLYKWYGNITSQQGVCLCYNLGL 269


>sp|P81395.1|MYB30_ANTMA RecName: Full=Myb-related protein 330
          Length = 274

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
 Frame = -2

Query: 405 TDNEIKNYWNTHIRRKLLSQGIDPKTHRRINAIASD---------------NGGGNNSIS 271
           TDNEIKNYWNTHI+RKL+S+GIDP+THR +N+  +                    N+   
Sbjct: 100 TDNEIKNYWNTHIKRKLVSRGIDPQTHRSLNSATTTATATPTVNNSCLDFRTSPSNSKNI 159

Query: 270 CIPTVDSFQMAKVGKSRDDSAHNASGNRGIGE------EEQQHQXXXXXXXXXXSVQSPT 109
           C+PT D+   +    S DD+  N+S             +E++             + S +
Sbjct: 160 CMPTTDNNNNS--SSSTDDTKCNSSTTEESQSLITPPPKEEEKSVPLVDLELSLGLPSQS 217

Query: 108 STN-SEEFKQKDSSFQTLVKPQPVLSHNICLC 16
             N S       S F  L +P   ++  +C+C
Sbjct: 218 QCNKSVSLNSSSSGFYDLFRPPAKVAQRMCVC 249


>ref|NP_001235662.1| MYB transcription factor MYB56 [Glycine max]
           gi|110931656|gb|ABH02827.1| MYB transcription factor
           MYB56 [Glycine max]
          Length = 300

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
 Frame = -2

Query: 405 TDNEIKNYWNTHIRRKLLSQGIDPKTHRRINAIAS--------------------DNGGG 286
           TDNEIKNYWNTHI+RKL S+GIDP+THR +NA ++                     N   
Sbjct: 99  TDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAASATPATTVTATAVPSSNSKKKIKNNNN 158

Query: 285 NNSISCIPTVDSFQMAKVGKSRDDSAHNASGNRGIGEEEQ--QHQ-XXXXXXXXXXSVQS 115
           NN+   +    ++   K+G     +A +++ + G+  EE    HQ             Q 
Sbjct: 159 NNNGFQLVNNSAYANTKIGTDM-IAAEDSNSSSGVTTEESFPHHQLNLDLSIGLPSQPQV 217

Query: 114 PTSTNSEEFK--------QKDSSFQTLVKPQPVLSHNICLCCNLGL 1
            +S N E+ K        QK      L          +CLC NLGL
Sbjct: 218 SSSLNPEKLKPEPQEHDDQKPQVLYQLYGKNITGQQGVCLCYNLGL 263


>dbj|BAJ33514.1| R2R3-MYB transcriptional factor [Dahlia pinnata]
          Length = 313

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 41/176 (23%)
 Frame = -2

Query: 405 TDNEIKNYWNTHIRRKLLSQGIDPKTHRRIN-------------AIASDNGGGNNSISCI 265
           TDNEIKNYWNTHIRRKLL++GIDP THR +N             A  + N   NN+ S  
Sbjct: 100 TDNEIKNYWNTHIRRKLLNRGIDPTTHRPVNDSPTNYPTTTTVTATTTTNNNNNNNSSLD 159

Query: 264 PTVDSF--------QMAKVGKSRDDSAHNASG--NRGIGEEEQQHQXXXXXXXXXXSVQS 115
            T  SF         + K  +  D+  HN+ G  +R I     + Q           + S
Sbjct: 160 VTTISFANPPPTTHHLVK-EEVEDEPKHNSDGSDHRKINSVLPEIQERCPDLNLELRM-S 217

Query: 114 PTSTNSEEFKQKDSSFQTLVKPQ------------------PVLSHNICLCCNLGL 1
           P   +S       SS  + + PQ                  P    NIC  C+LG+
Sbjct: 218 PPHHSSSSSSSSSSSSSSHIHPQLQQENHYHHQLLKTGGRSPPGGTNICFACSLGI 273


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