BLASTX nr result

ID: Coptis24_contig00022007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022007
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|1...   269   1e-69
emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]   263   8e-68
ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosy...   259   9e-67
ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-...   251   2e-64
ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp....   237   4e-60

>ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|118482072|gb|ABK92967.1|
           unknown [Populus trichocarpa]
           gi|222841295|gb|EEE78842.1| predicted protein [Populus
           trichocarpa]
          Length = 230

 Score =  269 bits (687), Expect = 1e-69
 Identities = 136/242 (56%), Positives = 159/242 (65%), Gaps = 6/242 (2%)
 Frame = +2

Query: 92  SRDITVSTAFL------LSLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITILLFSL 253
           S+ I+   AFL      L L  S +VAHN YSINL+SHP  TL LI +V++ I IL++S 
Sbjct: 17  SKSISAPQAFLIHLISGLGLAISLWVAHNFYSINLVSHPSITLRLIWIVESAIVILIYSR 76

Query: 254 LRQNPQQCSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRGVLGLPIGAFLM 433
            R +PQQCSY                                   V+RG+L LP+GA + 
Sbjct: 77  FRIDPQQCSYLKA--------------------------------VVRGILALPVGALVN 104

Query: 434 AFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLFANTKPTGSLEY 613
           A GAI LGAP+GIQYL KTI WSLLMS FT  PAASV+GSSW  WQR+FA TKP   LEY
Sbjct: 105 ALGAIALGAPVGIQYLPKTINWSLLMSSFTVAPAASVFGSSWTYWQRIFAQTKPNEPLEY 164

Query: 614 IICIPAHGAIIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVVSMGFVLVLGKR 793
           +ICIPAHGA+IG W GAWPMPLDWERPWQEWPICV+YGA+ GY VGM+ S GFVL  G+R
Sbjct: 165 MICIPAHGAVIGGWFGAWPMPLDWERPWQEWPICVTYGAMTGYLVGMLASSGFVLANGRR 224

Query: 794 QR 799
           QR
Sbjct: 225 QR 226


>emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]
          Length = 246

 Score =  263 bits (671), Expect = 8e-68
 Identities = 124/219 (56%), Positives = 154/219 (70%)
 Frame = +2

Query: 125 LSLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITILLFSLLRQNPQQCSYXXXXXXX 304
           L L  SF+  H+ +S NLIS P+ TL LI + +TPI +L++S  R+NP++CSY       
Sbjct: 50  LGLALSFWATHSFFSTNLISDPVHTLLLIWVFETPIVVLVYSRFRKNPKECSYWRA---- 105

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRGVLGLPIGAFLMAFGAIVLGAPIGIQYLE 484
                                       V RG+LG+P+GA +  FGAI LGAP+GIQYL 
Sbjct: 106 ----------------------------VGRGLLGIPLGALINIFGAIALGAPVGIQYLL 137

Query: 485 KTIYWSLLMSVFTFVPAASVYGSSWKDWQRLFANTKPTGSLEYIICIPAHGAIIGAWLGA 664
           +TI WSLLMS+ TFVPAA V+GSSW DWQR+FA+TKP G+++Y+IC+PAHGAIIGAWLGA
Sbjct: 138 RTINWSLLMSLLTFVPAACVFGSSWTDWQRVFAHTKPIGAIDYMICLPAHGAIIGAWLGA 197

Query: 665 WPMPLDWERPWQEWPICVSYGAVAGYTVGMVVSMGFVLV 781
           WPMPLDWERPWQEWP+CVSYGA+AGY V MV S+GF LV
Sbjct: 198 WPMPLDWERPWQEWPVCVSYGAMAGYLVAMVASLGFTLV 236


>ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class F
           protein-like [Vitis vinifera]
           gi|298204771|emb|CBI25269.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score =  259 bits (662), Expect = 9e-67
 Identities = 123/219 (56%), Positives = 152/219 (69%)
 Frame = +2

Query: 125 LSLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITILLFSLLRQNPQQCSYXXXXXXX 304
           L L  SF+  H+ +S NLIS P+ TL L  + +TPI +L++S  R+NP++CSY       
Sbjct: 49  LGLALSFWATHSFFSTNLISDPVHTLLLTWVFETPIVVLVYSRFRKNPKECSYWRA---- 104

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRGVLGLPIGAFLMAFGAIVLGAPIGIQYLE 484
                                       V RG+LG+P+GA +  FGAI LGAP+GIQYL 
Sbjct: 105 ----------------------------VGRGLLGIPLGALINIFGAIALGAPVGIQYLL 136

Query: 485 KTIYWSLLMSVFTFVPAASVYGSSWKDWQRLFANTKPTGSLEYIICIPAHGAIIGAWLGA 664
            TI WSLLMS+ TFVPAA V+GSSW DWQR+FA+TKP G+++Y+IC+PAHGAIIGAWLGA
Sbjct: 137 GTINWSLLMSLLTFVPAACVFGSSWTDWQRVFAHTKPIGAIDYMICLPAHGAIIGAWLGA 196

Query: 665 WPMPLDWERPWQEWPICVSYGAVAGYTVGMVVSMGFVLV 781
           WPMPLDWERPWQEWP+CVSYGA+AGY V MV S+GF LV
Sbjct: 197 WPMPLDWERPWQEWPVCVSYGAMAGYLVAMVASLGFTLV 235


>ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus]
           gi|449501593|ref|XP_004161410.1| PREDICTED:
           uncharacterized protein C1450.15-like [Cucumis sativus]
          Length = 225

 Score =  251 bits (641), Expect = 2e-64
 Identities = 131/252 (51%), Positives = 164/252 (65%), Gaps = 6/252 (2%)
 Frame = +2

Query: 77  MASSNSRDITVSTAFLL------SLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITI 238
           MAS++S  I++  AF L      +L  +F++AH I+S +LIS P  TL LI +VQ+PI I
Sbjct: 8   MASTSSTPISIPEAFFLHLISALALALAFWIAHYIFSTHLISDPSLTLFLILVVQSPIVI 67

Query: 239 LLFSLLRQNPQQCSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRGVLGLPI 418
           LL+S  R +  QCSY                                   V RG+LGLP 
Sbjct: 68  LLYSRYRTDRHQCSYFKA--------------------------------VARGLLGLPA 95

Query: 419 GAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLFANTKPT 598
           GA + AFGAIVLGAPIG QY  KT+ WSL+MS+F  VP+A V+GSSW DWQRLFA TKP 
Sbjct: 96  GAIINAFGAIVLGAPIGAQYFLKTLNWSLVMSLFNIVPSACVFGSSWIDWQRLFAYTKPI 155

Query: 599 GSLEYIICIPAHGAIIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVVSMGFVL 778
           G+++++ICIPAHGAIIGAW GAWPMPLDWERPWQEWPICV+YGA+ GY++ M  S+  VL
Sbjct: 156 GTIDHMICIPAHGAIIGAWFGAWPMPLDWERPWQEWPICVTYGAILGYSIAMAASL--VL 213

Query: 779 VLGKRQRHVKND 814
              +  +HVK D
Sbjct: 214 SHQRGLQHVKRD 225


>ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335985|gb|EFH66402.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  237 bits (605), Expect = 4e-60
 Identities = 112/224 (50%), Positives = 150/224 (66%)
 Frame = +2

Query: 125 LSLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITILLFSLLRQNPQQCSYXXXXXXX 304
           L L   F+V HNIY ++LIS P  TL L+ +++ PI ++++SLLR+NP++CSY       
Sbjct: 32  LFLAVGFWVIHNIYFVDLISDPSLTLRLLWIIEFPIVVIIYSLLRRNPEKCSYFRA---- 87

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRGVLGLPIGAFLMAFGAIVLGAPIGIQYLE 484
                                       V R ++GL  GA + AFGA+ LGAPIG+Q L 
Sbjct: 88  ----------------------------VGRSIVGLISGALINAFGAVSLGAPIGMQSLP 119

Query: 485 KTIYWSLLMSVFTFVPAASVYGSSWKDWQRLFANTKPTGSLEYIICIPAHGAIIGAWLGA 664
           +TI+WS LMSVFT VPA +V+G+SW DW R+FA+ KPTG++EY+I IPA+GAIIGAW GA
Sbjct: 120 RTIHWSFLMSVFTVVPATAVFGASWTDWHRVFASLKPTGNIEYMILIPAYGAIIGAWFGA 179

Query: 665 WPMPLDWERPWQEWPICVSYGAVAGYTVGMVVSMGFVLVLGKRQ 796
           WPMPLDWERPWQEWP+CV YGA+ G  VG +VS+  +++L K +
Sbjct: 180 WPMPLDWERPWQEWPVCVCYGAIGGCIVGQIVSLSLMILLRKHK 223


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