BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021910
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33923.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27

>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/90 (76%), Positives = 78/90 (86%)
 Frame = -3

Query: 270 ANLGKLDRGGWIHSYIEENERIEPDVLLSTSLVTMYAKCGAMDLAREVFSEMRERSVVSW 91
           A+LG+LDRG WIHSYI+ N  IEPDVLLST+L+TMYAKCGAMDLAR+VF +M  RSVVSW
Sbjct: 214 AHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSW 273

Query: 90  NSMIMGYGMHGYGEKALEMFLEMEKSGETP 1
           NSMIMGYGMHG  +KALEMFL+MEK G  P
Sbjct: 274 NSMIMGYGMHGQADKALEMFLDMEKRGPMP 303


>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 719

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/90 (76%), Positives = 78/90 (86%)
 Frame = -3

Query: 270 ANLGKLDRGGWIHSYIEENERIEPDVLLSTSLVTMYAKCGAMDLAREVFSEMRERSVVSW 91
           A+LG+LDRG WIHSYI+ N  IEPDVLLST+L+TMYAKCGAMDLAR+VF +M  RSVVSW
Sbjct: 363 AHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSW 422

Query: 90  NSMIMGYGMHGYGEKALEMFLEMEKSGETP 1
           NSMIMGYGMHG  +KALEMFL+MEK G  P
Sbjct: 423 NSMIMGYGMHGQADKALEMFLDMEKRGPMP 452


>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 595

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/90 (72%), Positives = 75/90 (83%)
 Frame = -3

Query: 270 ANLGKLDRGGWIHSYIEENERIEPDVLLSTSLVTMYAKCGAMDLAREVFSEMRERSVVSW 91
           ANLGKL  G W+HS+I  N  I+PDVLL T L+TMYAKCGAMDLA+ VF EM  RSVVSW
Sbjct: 315 ANLGKLSMGMWVHSFIRSNN-IKPDVLLLTCLLTMYAKCGAMDLAKGVFDEMPVRSVVSW 373

Query: 90  NSMIMGYGMHGYGEKALEMFLEMEKSGETP 1
           NSMIMGYG+HG G+KALE+FLEMEK+G+ P
Sbjct: 374 NSMIMGYGLHGIGDKALELFLEMEKAGQQP 403


>ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|222870244|gb|EEF07375.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/90 (70%), Positives = 78/90 (86%)
 Frame = -3

Query: 270 ANLGKLDRGGWIHSYIEENERIEPDVLLSTSLVTMYAKCGAMDLAREVFSEMRERSVVSW 91
           A L  LD+G W+HSY+++N  I+PD+LLST+L+TMYAKCGAMDLAREVF +M E+SVVSW
Sbjct: 363 AELKMLDQGKWVHSYMKDNG-IKPDMLLSTALLTMYAKCGAMDLAREVFDKMPEKSVVSW 421

Query: 90  NSMIMGYGMHGYGEKALEMFLEMEKSGETP 1
           NSMI+GYG+HG+G+KALEMF EMEK G  P
Sbjct: 422 NSMIIGYGIHGHGDKALEMFREMEKGGPMP 451


>ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 604

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267 NLGKLDRGGWIHSYIEEN-ERIEPDVLLSTSLVTMYAKCGAMDLAREVFSEMRERSVVSW 91
           +LG L+RG W+H  + E  +R+ PDVLL T+L+TMYAKCGAM+ ARE+F  M ERSV SW
Sbjct: 327 SLGDLERGKWVHGLVRERWDRLVPDVLLLTALLTMYAKCGAMETAREIFDSMSERSVPSW 386

Query: 90  NSMIMGYGMHGYGEKALEMFLEMEKSGETP 1
           NSMI+GYG+HG  EKALE+FLEMEKSG  P
Sbjct: 387 NSMIIGYGLHGQSEKALELFLEMEKSGPRP 416