BLASTX nr result

ID: Coptis24_contig00021634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021634
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus commu...   101   6e-20
ref|XP_002320328.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_002278468.2| PREDICTED: kinesin-4-like [Vitis vinifera]         98   6e-19
emb|CBI39561.3| unnamed protein product [Vitis vinifera]               98   6e-19
emb|CAN74504.1| hypothetical protein VITISV_015888 [Vitis vinifera]    98   6e-19

>ref|XP_002523135.1| kinesin heavy chain, putative [Ricinus communis]
           gi|223537697|gb|EEF39320.1| kinesin heavy chain,
           putative [Ricinus communis]
          Length = 1012

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/77 (68%), Positives = 55/77 (71%)
 Frame = +2

Query: 8   GVGGMLSFSMTSVVEDVLQQHGTRLSDIDLASXXXXXXXXXXXXXXGWLRKMVGVVGAKD 187
           G GG LSFS+ SVVEDVLQQHG RL D+DL S              GWLRKMVGVV AKD
Sbjct: 3   GEGGALSFSVASVVEDVLQQHGNRLKDLDLESRKAEEAASRRNEAAGWLRKMVGVVAAKD 62

Query: 188 LAAEPSEEEFRLGLRSG 238
           L AEPSEEEFRLGLRSG
Sbjct: 63  LPAEPSEEEFRLGLRSG 79


>ref|XP_002320328.1| predicted protein [Populus trichocarpa] gi|222861101|gb|EEE98643.1|
           predicted protein [Populus trichocarpa]
          Length = 957

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/77 (68%), Positives = 55/77 (71%)
 Frame = +2

Query: 8   GVGGMLSFSMTSVVEDVLQQHGTRLSDIDLASXXXXXXXXXXXXXXGWLRKMVGVVGAKD 187
           G GG LSFS+ SVVEDVLQQHG RL D+DL S              GWLRKMVGVV AKD
Sbjct: 3   GEGGTLSFSVASVVEDVLQQHGNRLGDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKD 62

Query: 188 LAAEPSEEEFRLGLRSG 238
           L AEPSEEEFRLGLRSG
Sbjct: 63  LPAEPSEEEFRLGLRSG 79


>ref|XP_002278468.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1056

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/74 (67%), Positives = 55/74 (74%)
 Frame = +2

Query: 17  GMLSFSMTSVVEDVLQQHGTRLSDIDLASXXXXXXXXXXXXXXGWLRKMVGVVGAKDLAA 196
           G+L FS+ SVVEDVLQQ G RLSD+DLAS              GWLR+MVGVVG +DLAA
Sbjct: 7   GVLDFSVASVVEDVLQQQGNRLSDVDLASRKAEEASLRRYEAAGWLRRMVGVVGGRDLAA 66

Query: 197 EPSEEEFRLGLRSG 238
           EPSEEEFRLGLRSG
Sbjct: 67  EPSEEEFRLGLRSG 80


>emb|CBI39561.3| unnamed protein product [Vitis vinifera]
          Length = 1044

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/74 (67%), Positives = 55/74 (74%)
 Frame = +2

Query: 17  GMLSFSMTSVVEDVLQQHGTRLSDIDLASXXXXXXXXXXXXXXGWLRKMVGVVGAKDLAA 196
           G+L FS+ SVVEDVLQQ G RLSD+DLAS              GWLR+MVGVVG +DLAA
Sbjct: 7   GVLDFSVASVVEDVLQQQGNRLSDVDLASRKAEEASLRRYEAAGWLRRMVGVVGGRDLAA 66

Query: 197 EPSEEEFRLGLRSG 238
           EPSEEEFRLGLRSG
Sbjct: 67  EPSEEEFRLGLRSG 80


>emb|CAN74504.1| hypothetical protein VITISV_015888 [Vitis vinifera]
          Length = 1058

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/74 (67%), Positives = 55/74 (74%)
 Frame = +2

Query: 17  GMLSFSMTSVVEDVLQQHGTRLSDIDLASXXXXXXXXXXXXXXGWLRKMVGVVGAKDLAA 196
           G+L FS+ SVVEDVLQQ G RLSD+DLAS              GWLR+MVGVVG +DLAA
Sbjct: 7   GVLDFSVASVVEDVLQQQGNRLSDVDLASRKAEEASLRRYEAAGWLRRMVGVVGGRDLAA 66

Query: 197 EPSEEEFRLGLRSG 238
           EPSEEEFRLGLRSG
Sbjct: 67  EPSEEEFRLGLRSG 80


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