BLASTX nr result

ID: Coptis24_contig00021508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021508
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267976.2| PREDICTED: uncharacterized protein LOC100263...    99   8e-19
emb|CAN68733.1| hypothetical protein VITISV_012100 [Vitis vinifera]    99   8e-19
emb|CBI27347.3| unnamed protein product [Vitis vinifera]               95   1e-17
ref|XP_004164974.1| PREDICTED: uncharacterized LOC101212264 [Cuc...    82   8e-14
ref|XP_002526589.1| DNA binding protein, putative [Ricinus commu...    82   8e-14

>ref|XP_002267976.2| PREDICTED: uncharacterized protein LOC100263252 [Vitis vinifera]
          Length = 495

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 70/211 (33%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
 Frame = -1

Query: 643 DNIIQSSTSEADEENGSPTSVVTNSASTTQDRSPMKVDSSSKDNASKAESPGAETPTMSL 464
           D +     +   EEN SP+ V+T S+S   +  PMK +   ++  +K E    E  T +L
Sbjct: 210 DRMFLPELNPPTEENASPSPVLTTSSSVPDEPLPMKFELFPQEIFAK-ECSVEEASTRTL 268

Query: 463 KLFGRTVLVTDSHRRXXXXXXXXXXSAAESHKENMVTDEAEPAKTFHQNSVENVYSMGSW 284
           KLFGRTVLVTDSHR             ++ + E M  +      T  ++S EN  S  SW
Sbjct: 269 KLFGRTVLVTDSHR--PSSPTTSKSQPSDINNEGMHVETLPWNSTPTESSPEN--SSFSW 324

Query: 283 PHGNPS---MFYQMQLQSGNQNPVAGSSVLSVPWWALQGGLPFTFFPSFNMNS------- 134
            H  P     FY M  Q  + N V   +   +PWW   GG+P  F P  + +S       
Sbjct: 325 SHLQPQPSGAFYYMHFQKEDSNCVEAGTTAPLPWWTFYGGIPIPFLPLHHQDSIKAHEDT 384

Query: 133 ---------VQIPPSWTGSNTSSASEVGSED 68
                    +Q   SWTGSNT S +E G+ D
Sbjct: 385 KFAETHDKEIQKEGSWTGSNTGSVNEGGNCD 415


>emb|CAN68733.1| hypothetical protein VITISV_012100 [Vitis vinifera]
          Length = 543

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 70/211 (33%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
 Frame = -1

Query: 643 DNIIQSSTSEADEENGSPTSVVTNSASTTQDRSPMKVDSSSKDNASKAESPGAETPTMSL 464
           D +     +   EEN SP+ V+T S+S   +  PMK +   ++  +K E    E  T +L
Sbjct: 258 DRMFLPELNPPTEENASPSPVLTTSSSVPDEPLPMKFELFPQEIFAK-ECSVEEASTRTL 316

Query: 463 KLFGRTVLVTDSHRRXXXXXXXXXXSAAESHKENMVTDEAEPAKTFHQNSVENVYSMGSW 284
           KLFGRTVLVTDSHR             ++ + E M  +      T  ++S EN  S  SW
Sbjct: 317 KLFGRTVLVTDSHR--PSSPTTSKSQPSDINNEGMHVETLPWNSTPTESSPEN--SSFSW 372

Query: 283 PHGNPS---MFYQMQLQSGNQNPVAGSSVLSVPWWALQGGLPFTFFPSFNMNS------- 134
            H  P     FY M  Q  + N V   +   +PWW   GG+P  F P  + +S       
Sbjct: 373 SHLQPQPSGAFYYMHFQKEDSNCVEAGTTAPLPWWTFYGGIPIPFLPLHHQDSIKAHEDT 432

Query: 133 ---------VQIPPSWTGSNTSSASEVGSED 68
                    +Q   SWTGSNT S +E G+ D
Sbjct: 433 KFAETHDKEIQKEGSWTGSNTGSVNEGGNCD 463


>emb|CBI27347.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
 Frame = -1

Query: 643 DNIIQSSTSEADEENGSPTSVVTNSASTTQDRSPMKVDSSSKDNASKAESPGAETPTMSL 464
           D +     +   EEN SP+ V+T S+S   +  PMK +   ++  +K E    E  T +L
Sbjct: 210 DRMFLPELNPPTEENASPSPVLTTSSSVPDEPLPMKFELFPQEIFAK-ECSVEEASTRTL 268

Query: 463 KLFGRTVLVTDSHRRXXXXXXXXXXSAAESHKENMVTDEAEPAKTFHQNSVENVYSMGSW 284
           KLFGRTVLVTDSHR             ++ + E M  +      T  ++S EN  S  SW
Sbjct: 269 KLFGRTVLVTDSHR--PSSPTTSKSQPSDINNEGMHVETLPWNSTPTESSPEN--SSFSW 324

Query: 283 PHGNPS---MFYQMQLQSGNQNPVAGSSVLSVPWWALQGGLPFTFFPSFNMNS------- 134
            H  P     FY M  Q  + N V   +   +PWW   GG+P  F P  + +S       
Sbjct: 325 SHLQPQPSGAFYYMHFQKEDSNCVEAGTTAPLPWWTFYGGIPIPFLPLHHQDSIKAHEDT 384

Query: 133 ---------VQIPPSWTGSNTSSASE 83
                    +Q   SWTGSNT S+ +
Sbjct: 385 KFAETHDKEIQKEGSWTGSNTGSSHQ 410


>ref|XP_004164974.1| PREDICTED: uncharacterized LOC101212264 [Cucumis sativus]
          Length = 406

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 18/225 (8%)
 Frame = -1

Query: 652 STKDNIIQSSTSEADEENGSPTSVVTNSASTTQDRSPMKVDSSSKDNASKAESPGAETPT 473
           S   +I  +  + +  +N SPT+ +    S   ++ P  ++  +KDN  + +    E   
Sbjct: 195 SPDSSIPSTEPNSSSLDNESPTAALGIENSIPHEKIPTNLELFTKDNVIEKDDSTKEVSI 254

Query: 472 MSLKLFGRTVLVTDSHRRXXXXXXXXXXSAAESHKENMVTDEAEPAKTFHQNSVENVYSM 293
            SLKLFGRTVL+TD H+                 + +M   + +P +   Q S  N   M
Sbjct: 255 QSLKLFGRTVLITDPHKHTPIL------------ENSMPEADRKPGENQKQVSPWNSIVM 302

Query: 292 GS--------WPHGNPSMFYQMQLQSGNQNPVAGSSVLSVPWWALQGGLPFTFFPSFNM- 140
            S        W HG    FY +QL +G+     G S + V WW+  G  PF+F   FN  
Sbjct: 303 DSSTGNTDCTWNHG---AFYFIQLNNGDSK--QGDSAVPVSWWSSYGSYPFSFVHCFNQA 357

Query: 139 --NSVQI-------PPSWTGSNTSSASEVGSEDKCDDAAESINQE 32
             N  Q+         SW GSNT S +   + DK  +  ++ N E
Sbjct: 358 DSNPNQVNDKETHKDQSWCGSNTGSVNSGENGDKVSENDKTKNGE 402


>ref|XP_002526589.1| DNA binding protein, putative [Ricinus communis]
           gi|223534083|gb|EEF35801.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 468

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
 Frame = -1

Query: 619 SEADEENGSPTSV-VTNSASTTQDRSPMKVDSSSKDNASKAESPGAETPTMSLKLFGRTV 443
           + A E N SP+    T  A   Q     K++   ++NA   E  G ET T SLKLFG+TV
Sbjct: 197 NSAPENNESPSPAPATAEAHDEQSLKVQKLELFPEENAFAEEGVGEETSTRSLKLFGKTV 256

Query: 442 LVTDSHRRXXXXXXXXXXSAAESHKENMVTDEAEPAKTFHQNSVENVYSMGS----W--- 284
           LV + +R           S+  +    + T++ +P +      +     +G+    W   
Sbjct: 257 LVNECNR----------PSSPANGSPTLDTNDEKPVQPLPWKPMAIELQLGNGECNWSNL 306

Query: 283 PHGNPSMFYQMQLQSGNQNPVAGSSVLSVPWWALQGGLPFTFFP---------------- 152
           P G P     +QLQ  N N     S    PWWA  GG+P+ F P                
Sbjct: 307 PQGPPGSLCYLQLQKENSNSGEVGSATPFPWWAFYGGMPYPFIPCHKQEPATEEHLDSSG 366

Query: 151 -SFNMNSVQIPPSWTGSNTSSASEVGSEDKCDDAAESINQEVSSNDNSC 8
                  +Q   SWTGSN+ S +E  + DK      +++ E  S   SC
Sbjct: 367 EDIQYKEIQKEGSWTGSNSGSVNEGENADK------NMDGETESRHFSC 409


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