BLASTX nr result
ID: Coptis24_contig00021496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021496 (667 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein... 58 2e-06 emb|CBI23316.3| unnamed protein product [Vitis vinifera] 58 2e-06 ref|NP_001067560.1| Os11g0231600 [Oryza sativa Japonica Group] g... 56 7e-06 >ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis vinifera] Length = 665 Score = 57.8 bits (138), Expect = 2e-06 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 22/189 (11%) Frame = -1 Query: 586 LNGLYNINSLTVSAPFLQAISELLTELENWPTPFSKLRYLHVETWLSRGSFRAIAFLLLN 407 L L ++ +LTV L+ +S L E+++ P+P SK RYL + T + IA LL + Sbjct: 479 LKQLSHVENLTVGTWCLEVLSVL--EMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKS 536 Query: 406 SPNIEGLDLDVDPTEV----------SSSNLAEDGG------VECSLKFKLYHLKLVEFH 275 SP++E L +DV+P V + +D G E S K L +LK+++ Sbjct: 537 SPDLEKLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGESFWESEEKSFKCLLQNLKIIKIV 596 Query: 274 YVTGSAAELQ----YLNILSEKAVTLKKVSIFTSKV--WTRPKRRELDIPKEVLSLSRAS 113 ++Q ++ L + A L+K+ I KV T +EL + +++LS +RAS Sbjct: 597 GFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSYAAQELPVVQKLLSFTRAS 656 Query: 112 SDVTIHLCK 86 + K Sbjct: 657 PRAAVLFSK 665 >emb|CBI23316.3| unnamed protein product [Vitis vinifera] Length = 192 Score = 57.8 bits (138), Expect = 2e-06 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 22/189 (11%) Frame = -1 Query: 586 LNGLYNINSLTVSAPFLQAISELLTELENWPTPFSKLRYLHVETWLSRGSFRAIAFLLLN 407 L L ++ +LTV L+ +S L E+++ P+P SK RYL + T + IA LL + Sbjct: 6 LKQLSHVENLTVGTWCLEVLSVL--EMKSMPSPLSKHRYLILNTLPKKWDLPGIASLLKS 63 Query: 406 SPNIEGLDLDVDPTEV----------SSSNLAEDGG------VECSLKFKLYHLKLVEFH 275 SP++E L +DV+P V + +D G E S K L +LK+++ Sbjct: 64 SPDLEKLHIDVNPLNVLKFWEHQVFNNYYKYGDDHGESFWESEEKSFKCLLQNLKIIKIV 123 Query: 274 YVTGSAAELQ----YLNILSEKAVTLKKVSIFTSKV--WTRPKRRELDIPKEVLSLSRAS 113 ++Q ++ L + A L+K+ I KV T +EL + +++LS +RAS Sbjct: 124 GFDPGYCDIQFAIAFIEFLLKNAQVLEKMVINVRKVKRQTSYAAQELPVVQKLLSFTRAS 183 Query: 112 SDVTIHLCK 86 + K Sbjct: 184 PRAAVLFSK 192 >ref|NP_001067560.1| Os11g0231600 [Oryza sativa Japonica Group] gi|62734103|gb|AAX96212.1| F-box domain, putative [Oryza sativa Japonica Group] gi|77549382|gb|ABA92179.1| F-box domain containing protein, expressed [Oryza sativa Japonica Group] gi|113644782|dbj|BAF27923.1| Os11g0231600 [Oryza sativa Japonica Group] gi|215768471|dbj|BAH00700.1| unnamed protein product [Oryza sativa Japonica Group] Length = 433 Score = 55.8 bits (133), Expect = 7e-06 Identities = 45/166 (27%), Positives = 74/166 (44%) Frame = -1 Query: 622 IVDGDGYHMIKCLNGLYNINSLTVSAPFLQAISELLTELENWPTPFSKLRYLHVETWLSR 443 + DG+G +++ L+G + T S F+ + W FSKL+ L V W Sbjct: 275 VSDGNGCVLLQGLSGATTLELTTESRVFMFRRDLM------WCPIFSKLKTLLVNEWFMT 328 Query: 442 GSFRAIAFLLLNSPNIEGLDLDVDPTEVSSSNLAEDGGVECSLKFKLYHLKLVEFHYVTG 263 + +A LL +SP +E L L + E + ED C F +L +VE G Sbjct: 329 SNMSGLACLLEHSPIVEKLTLQLS-KEPRNFVEIEDSDKPCKQAFLFKNLNIVEIKCQEG 387 Query: 262 SAAELQYLNILSEKAVTLKKVSIFTSKVWTRPKRRELDIPKEVLSL 125 + L ILS+ + L K+++ +K RP+R+ + +L L Sbjct: 388 DERVKKILKILSQNGIPLAKINVLQTK--RRPRRKLSTVVHIILCL 431