BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021494
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]    94   1e-17
ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arab...    89   3e-16
ref|NP_565377.1| pentatricopeptide repeat-containing protein [Ar...    89   4e-16
ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    89   5e-16

>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
           [Vitis vinifera]
          Length = 593

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 5/73 (6%)
 Frame = -2

Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNG-----LGDDGLQL 41
           S  R DL L N ++EMYG C SM +A++VF+ M +RD+DSWH M+NG     +GDDGLQL
Sbjct: 277 STFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMANRDMDSWHLMINGYANNAMGDDGLQL 336

Query: 40  FEEMRKLGLKPNE 2
           +E+MRKLGL+PNE
Sbjct: 337 YEQMRKLGLEPNE 349


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 5/73 (6%)
 Frame = -2

Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNG-----LGDDGLQL 41
           S  R DL L N ++EMYG C SM +A++VF+ M +RD+DSWH M+NG     +GDDGLQL
Sbjct: 311 STFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMTNRDMDSWHLMINGYANNAMGDDGLQL 370

Query: 40  FEEMRKLGLKPNE 2
           +E+MRKLGL+PNE
Sbjct: 371 YEQMRKLGLEPNE 383


>ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
           lyrata] gi|297331814|gb|EFH62233.1| hypothetical protein
           ARALYDRAFT_480424 [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 5/73 (6%)
 Frame = -2

Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMM-----NGLGDDGLQL 41
           S+ RGD  L N +I M+G+C S+ +AK+VF+ M+D+D+DSWH MM     NG+GDD L L
Sbjct: 234 SKFRGDPKLNNMVISMFGECRSVTDAKRVFDHMVDKDMDSWHLMMRAYSDNGMGDDALHL 293

Query: 40  FEEMRKLGLKPNE 2
           FEEM K GLKPNE
Sbjct: 294 FEEMTKQGLKPNE 306


>ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15690 gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24
           [Arabidopsis thaliana] gi|20197709|gb|AAD17413.2|
           Expressed protein [Arabidopsis thaliana]
           gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24
           [Arabidopsis thaliana] gi|330251336|gb|AEC06430.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 579

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 5/73 (6%)
 Frame = -2

Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMM-----NGLGDDGLQL 41
           S+ RGD  L N +I M+G+C S+ +AK+VF+ M+D+D+DSWH MM     NG+GDD L L
Sbjct: 265 SKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHL 324

Query: 40  FEEMRKLGLKPNE 2
           FEEM K GLKPNE
Sbjct: 325 FEEMTKHGLKPNE 337


>ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g15690-like [Cucumis sativus]
          Length = 588

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 5/72 (6%)
 Frame = -2

Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMM-----NGLGDDGLQL 41
           S  R DL L N ++EMYG+C SM++A++VF+ M DR +DSWH MM     NGLGD+GL+L
Sbjct: 272 SSCRSDLQLNNEVLEMYGRCGSMSDARRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLEL 331

Query: 40  FEEMRKLGLKPN 5
           FE M+ LGL+PN
Sbjct: 332 FENMKNLGLQPN 343