BLASTX nr result
ID: Coptis24_contig00021494
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021494 (206 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17 emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera] 94 1e-17 ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arab... 89 3e-16 ref|NP_565377.1| pentatricopeptide repeat-containing protein [Ar... 89 4e-16 ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 89 5e-16 >ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690 [Vitis vinifera] Length = 593 Score = 93.6 bits (231), Expect = 1e-17 Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 5/73 (6%) Frame = -2 Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNG-----LGDDGLQL 41 S R DL L N ++EMYG C SM +A++VF+ M +RD+DSWH M+NG +GDDGLQL Sbjct: 277 STFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMANRDMDSWHLMINGYANNAMGDDGLQL 336 Query: 40 FEEMRKLGLKPNE 2 +E+MRKLGL+PNE Sbjct: 337 YEQMRKLGLEPNE 349 >emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera] Length = 627 Score = 93.6 bits (231), Expect = 1e-17 Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 5/73 (6%) Frame = -2 Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMMNG-----LGDDGLQL 41 S R DL L N ++EMYG C SM +A++VF+ M +RD+DSWH M+NG +GDDGLQL Sbjct: 311 STFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMTNRDMDSWHLMINGYANNAMGDDGLQL 370 Query: 40 FEEMRKLGLKPNE 2 +E+MRKLGL+PNE Sbjct: 371 YEQMRKLGLEPNE 383 >ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp. lyrata] gi|297331814|gb|EFH62233.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp. lyrata] Length = 548 Score = 89.4 bits (220), Expect = 3e-16 Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 5/73 (6%) Frame = -2 Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMM-----NGLGDDGLQL 41 S+ RGD L N +I M+G+C S+ +AK+VF+ M+D+D+DSWH MM NG+GDD L L Sbjct: 234 SKFRGDPKLNNMVISMFGECRSVTDAKRVFDHMVDKDMDSWHLMMRAYSDNGMGDDALHL 293 Query: 40 FEEMRKLGLKPNE 2 FEEM K GLKPNE Sbjct: 294 FEEMTKQGLKPNE 306 >ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15690 gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24 [Arabidopsis thaliana] gi|20197709|gb|AAD17413.2| Expressed protein [Arabidopsis thaliana] gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24 [Arabidopsis thaliana] gi|330251336|gb|AEC06430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 579 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/73 (57%), Positives = 54/73 (73%), Gaps = 5/73 (6%) Frame = -2 Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMM-----NGLGDDGLQL 41 S+ RGD L N +I M+G+C S+ +AK+VF+ M+D+D+DSWH MM NG+GDD L L Sbjct: 265 SKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHL 324 Query: 40 FEEMRKLGLKPNE 2 FEEM K GLKPNE Sbjct: 325 FEEMTKHGLKPNE 337 >ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g15690-like [Cucumis sativus] Length = 588 Score = 88.6 bits (218), Expect = 5e-16 Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 5/72 (6%) Frame = -2 Query: 205 SQMRGDLVLLNNLIEMYGKCESMNEAKQVFERMLDRDLDSWHAMM-----NGLGDDGLQL 41 S R DL L N ++EMYG+C SM++A++VF+ M DR +DSWH MM NGLGD+GL+L Sbjct: 272 SSCRSDLQLNNEVLEMYGRCGSMSDARRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLEL 331 Query: 40 FEEMRKLGLKPN 5 FE M+ LGL+PN Sbjct: 332 FENMKNLGLQPN 343