BLASTX nr result

ID: Coptis24_contig00021492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021492
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627109.1| Zinc finger protein [Medicago truncatula] gi...    58   2e-06

>ref|XP_003627109.1| Zinc finger protein [Medicago truncatula]
           gi|355521131|gb|AET01585.1| Zinc finger protein
           [Medicago truncatula]
          Length = 517

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = +1

Query: 466 MMLNNLLIQPHSVMDENMSSNLTCTSDEPLASSGSRADAGT-----MCRQQPLASPHQTQ 630
           M+   ++ Q   V++ENMS NLT  S E   SSG+R + GT       +QQ L  P  TQ
Sbjct: 1   MVKGLMMFQQQQVVEENMS-NLTSASGEASVSSGNRTEIGTSSSYPQVQQQYLVPP--TQ 57

Query: 631 TSVVKRKRNLPGNPDP 678
           +  +K+KRNLPGNPDP
Sbjct: 58  SQPMKKKRNLPGNPDP 73


Top