BLASTX nr result

ID: Coptis24_contig00021490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021490
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15253.3| unnamed protein product [Vitis vinifera]              353   8e-96
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...   353   8e-96
ref|XP_002444289.1| hypothetical protein SORBIDRAFT_07g019540 [S...   349   2e-94
ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7...   348   5e-94
ref|XP_002330092.1| ABC transporter family, cholesterol/phosphol...   343   9e-93

>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
          Length = 928

 Score =  353 bits (907), Expect = 8e-96
 Identities = 173/189 (91%), Positives = 179/189 (94%)
 Frame = -3

Query: 568  MLGPNGAGKTSFINMMIGLVPPSSGTAFIHGMDIRTDMDKIYTSMGVCPQHDLLWETLTG 389
            MLGPNGAGKTSFI+MMIGL  P+SGTAF+ G+DIR DMD IYTSMGVCPQHDLLWETLTG
Sbjct: 642  MLGPNGAGKTSFISMMIGLTVPTSGTAFVEGLDIRIDMDGIYTSMGVCPQHDLLWETLTG 701

Query: 388  REHLLFYGRLKNLKGVALAQAVEESLRSVNLFHGGVGDKRVGKYSGGMKRRLSVATSLIG 209
            REHLLFYGRLKNLKG AL QAVEESL+SVNLFHGGVGDK+ GKYSGGMKRRLSVA SLIG
Sbjct: 702  REHLLFYGRLKNLKGAALTQAVEESLKSVNLFHGGVGDKQAGKYSGGMKRRLSVAISLIG 761

Query: 208  DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSL 29
            DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQ RAIILTTHSMEEAEVLCDRLGIFVDGSL
Sbjct: 762  DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEVLCDRLGIFVDGSL 821

Query: 28   QCIGNPKEL 2
            QCIGNPKEL
Sbjct: 822  QCIGNPKEL 830


>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score =  353 bits (907), Expect = 8e-96
 Identities = 173/189 (91%), Positives = 179/189 (94%)
 Frame = -3

Query: 568  MLGPNGAGKTSFINMMIGLVPPSSGTAFIHGMDIRTDMDKIYTSMGVCPQHDLLWETLTG 389
            MLGPNGAGKTSFI+MMIGL  P+SGTAF+ G+DIR DMD IYTSMGVCPQHDLLWETLTG
Sbjct: 663  MLGPNGAGKTSFISMMIGLTVPTSGTAFVEGLDIRIDMDGIYTSMGVCPQHDLLWETLTG 722

Query: 388  REHLLFYGRLKNLKGVALAQAVEESLRSVNLFHGGVGDKRVGKYSGGMKRRLSVATSLIG 209
            REHLLFYGRLKNLKG AL QAVEESL+SVNLFHGGVGDK+ GKYSGGMKRRLSVA SLIG
Sbjct: 723  REHLLFYGRLKNLKGAALTQAVEESLKSVNLFHGGVGDKQAGKYSGGMKRRLSVAISLIG 782

Query: 208  DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSL 29
            DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQ RAIILTTHSMEEAEVLCDRLGIFVDGSL
Sbjct: 783  DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEVLCDRLGIFVDGSL 842

Query: 28   QCIGNPKEL 2
            QCIGNPKEL
Sbjct: 843  QCIGNPKEL 851


>ref|XP_002444289.1| hypothetical protein SORBIDRAFT_07g019540 [Sorghum bicolor]
            gi|241940639|gb|EES13784.1| hypothetical protein
            SORBIDRAFT_07g019540 [Sorghum bicolor]
          Length = 960

 Score =  349 bits (895), Expect = 2e-94
 Identities = 165/189 (87%), Positives = 182/189 (96%)
 Frame = -3

Query: 568  MLGPNGAGKTSFINMMIGLVPPSSGTAFIHGMDIRTDMDKIYTSMGVCPQHDLLWETLTG 389
            MLGPNGAGKTSFI+MMIGL+PP+SGTA++HGMDIRTDMD+IYT+MGVCPQHDLLWETLTG
Sbjct: 674  MLGPNGAGKTSFISMMIGLIPPTSGTAYVHGMDIRTDMDEIYTNMGVCPQHDLLWETLTG 733

Query: 388  REHLLFYGRLKNLKGVALAQAVEESLRSVNLFHGGVGDKRVGKYSGGMKRRLSVATSLIG 209
            REHLLFYGRLKNLKG  L +AV++SL+SVNLFHGGVGDK+VGKYSGGMKRRLSVA SLIG
Sbjct: 734  REHLLFYGRLKNLKGTELLKAVDDSLKSVNLFHGGVGDKQVGKYSGGMKRRLSVAISLIG 793

Query: 208  DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSL 29
            DPKVV+MDEPSTGLDPASRNNLW+VVK AK++RAIILTTHSMEEAEVLCDRLGIFVDG  
Sbjct: 794  DPKVVFMDEPSTGLDPASRNNLWSVVKEAKRNRAIILTTHSMEEAEVLCDRLGIFVDGGF 853

Query: 28   QCIGNPKEL 2
            QC+GNPKEL
Sbjct: 854  QCLGNPKEL 862


>ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
          Length = 949

 Score =  348 bits (892), Expect = 5e-94
 Identities = 169/189 (89%), Positives = 177/189 (93%)
 Frame = -3

Query: 568  MLGPNGAGKTSFINMMIGLVPPSSGTAFIHGMDIRTDMDKIYTSMGVCPQHDLLWETLTG 389
            MLGPNGAGKTSFINMMIGL  P+SGTA++ G+D+RT MD IYTSMGVCPQHDLLWE+LTG
Sbjct: 663  MLGPNGAGKTSFINMMIGLTKPTSGTAYVQGLDLRTHMDGIYTSMGVCPQHDLLWESLTG 722

Query: 388  REHLLFYGRLKNLKGVALAQAVEESLRSVNLFHGGVGDKRVGKYSGGMKRRLSVATSLIG 209
            REHLLFYGRLKNLKG AL QAVEESL+SVNLFHGGV DK+ GKYSGGMKRRLSVA SLIG
Sbjct: 723  REHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIG 782

Query: 208  DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSL 29
            DPKVVYMDEPSTGLDPASR NLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDG L
Sbjct: 783  DPKVVYMDEPSTGLDPASRKNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGGL 842

Query: 28   QCIGNPKEL 2
            QCIGNPKEL
Sbjct: 843  QCIGNPKEL 851


>ref|XP_002330092.1| ABC transporter family, cholesterol/phospholipid flippase [Populus
            trichocarpa] gi|222871226|gb|EEF08357.1| ABC transporter
            family, cholesterol/phospholipid flippase [Populus
            trichocarpa]
          Length = 911

 Score =  343 bits (881), Expect = 9e-93
 Identities = 165/189 (87%), Positives = 179/189 (94%)
 Frame = -3

Query: 568  MLGPNGAGKTSFINMMIGLVPPSSGTAFIHGMDIRTDMDKIYTSMGVCPQHDLLWETLTG 389
            MLGPNGAGKTSFI+MMIGL  P++GTA++ G+DIRT+MD +YTSMGVCPQHDLLWETLTG
Sbjct: 625  MLGPNGAGKTSFISMMIGLTTPTTGTAYVEGLDIRTEMDWVYTSMGVCPQHDLLWETLTG 684

Query: 388  REHLLFYGRLKNLKGVALAQAVEESLRSVNLFHGGVGDKRVGKYSGGMKRRLSVATSLIG 209
            REHLLFYGRLKNL+G AL +AVEESLRSVNLF+GGV DK+ GKYSGGMKRRLSVA SLIG
Sbjct: 685  REHLLFYGRLKNLRGAALKRAVEESLRSVNLFNGGVADKKAGKYSGGMKRRLSVAISLIG 744

Query: 208  DPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSL 29
            DPKVVYMDEPSTGLDPASR+NLWNVVKRAKQDRAIILTTHSMEEAE LCDRLGIFVDGSL
Sbjct: 745  DPKVVYMDEPSTGLDPASRSNLWNVVKRAKQDRAIILTTHSMEEAEYLCDRLGIFVDGSL 804

Query: 28   QCIGNPKEL 2
            QC+GNPKEL
Sbjct: 805  QCVGNPKEL 813


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