BLASTX nr result

ID: Coptis24_contig00021482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021482
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276361.1| PREDICTED: uncharacterized protein At5g39865...   232   3e-59
ref|XP_002278362.1| PREDICTED: uncharacterized protein At5g39865...   228   4e-58
emb|CAN73338.1| hypothetical protein VITISV_042400 [Vitis vinifera]   219   2e-55
ref|XP_004143166.1| PREDICTED: uncharacterized protein At5g39865...   210   1e-52
ref|XP_004166739.1| PREDICTED: uncharacterized protein At5g39865...   210   1e-52

>ref|XP_002276361.1| PREDICTED: uncharacterized protein At5g39865 [Vitis vinifera]
          Length = 239

 Score =  232 bits (592), Expect = 3e-59
 Identities = 120/194 (61%), Positives = 137/194 (70%), Gaps = 14/194 (7%)
 Frame = +2

Query: 11  KKPSIFHRVRVATSILRNWTHPTTT-----KPDPSTQKI---------GIVIYFTSLRIV 148
           K+PSIFHRVRV TS+LRNW+   T      KP+P+  +           +V+YFTSLR+V
Sbjct: 45  KRPSIFHRVRVVTSVLRNWSSTQTNPEPNPKPEPAPPQPCVSLTGGDQSVVVYFTSLRVV 104

Query: 149 RKTFEDCKTVRSILRSFRVKIDERDLSMDLGFXXXXXXXXXXXXXXSLPRVFIGGRYIGG 328
           RKTFEDC TVRSILR FRVK+DERDLSMD GF              SLPRVFIGGRY+GG
Sbjct: 105 RKTFEDCSTVRSILRGFRVKVDERDLSMDAGF-LDELKGILGRKKLSLPRVFIGGRYVGG 163

Query: 329 AEEIRGLHENGELKKIVDGLPVDEIGVCDNCGGYTFLLCDQCDGSHKLFMEKGGGFRSCF 508
           AEEIR LHE GELKK++ G PV   GVCD CGGY F+LC+ CDGS K++ EK  GFR C 
Sbjct: 164 AEEIRQLHETGELKKLLGGFPV-AAGVCDECGGYRFMLCENCDGSRKVYSEK-TGFRICT 221

Query: 509 VCNENGLIRCPSCS 550
            CNENGLIRCPSCS
Sbjct: 222 ACNENGLIRCPSCS 235


>ref|XP_002278362.1| PREDICTED: uncharacterized protein At5g39865 [Vitis vinifera]
           gi|297745854|emb|CBI15910.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  228 bits (582), Expect = 4e-58
 Identities = 122/205 (59%), Positives = 140/205 (68%), Gaps = 21/205 (10%)
 Frame = +2

Query: 2   ETPKKPSIFHRVRVATSILRNWT-HPTT--------------TKPDPSTQKIG----IVI 124
           +TPKK SIFHRVRVAT++LR+W  HP                T  +P     G    IV+
Sbjct: 40  QTPKKSSIFHRVRVATAVLRSWAPHPAQQVETNAASVPEEPLTPSEPLISIPGAESRIVV 99

Query: 125 YFTSLRIVRKTFEDCKTVRSILRSFRVKIDERDLSMDLGFXXXXXXXXXXXXXXSLPRVF 304
           YFTSLR+VR TFEDC+ VRSILR FRV +DERDL+MD GF              +LPRVF
Sbjct: 100 YFTSLRVVRSTFEDCRVVRSILRGFRVSMDERDLAMDSGFLEELQGILGQTKL-TLPRVF 158

Query: 305 IGGRYIGGAEEIRGLHENGELKKIVDGLPVDEIGVCDNCGGYTFLLCDQCDGSHKLFMEK 484
           IGGRYIGGAEEIR LHE GELKK V+GLP  E GVC+ CGGY F+LC +C+GSHK + EK
Sbjct: 159 IGGRYIGGAEEIRQLHEIGELKKFVEGLPAAESGVCEMCGGYGFILCHECNGSHKCYSEK 218

Query: 485 GG--GFRSCFVCNENGLIRCPSCSS 553
           G   GFRSC  CNENGLIRCPSCS+
Sbjct: 219 GDTIGFRSCTDCNENGLIRCPSCSA 243


>emb|CAN73338.1| hypothetical protein VITISV_042400 [Vitis vinifera]
          Length = 300

 Score =  219 bits (559), Expect = 2e-55
 Identities = 115/189 (60%), Positives = 132/189 (69%), Gaps = 14/189 (7%)
 Frame = +2

Query: 11  KKPSIFHRVRVATSILRNWTHPTTT-----KPDPSTQKI---------GIVIYFTSLRIV 148
           K+PSIFHRVRV TS+LRNW+   T      KP+P+  +           +V+YFTSLR+V
Sbjct: 45  KRPSIFHRVRVVTSVLRNWSSTQTNPEPNPKPEPAPPQPCVSLTGGDQSVVVYFTSLRVV 104

Query: 149 RKTFEDCKTVRSILRSFRVKIDERDLSMDLGFXXXXXXXXXXXXXXSLPRVFIGGRYIGG 328
           RKTFEDC TVRSILR FRVK+DERDLSMD GF              SLPRVFIGGRY+GG
Sbjct: 105 RKTFEDCSTVRSILRGFRVKVDERDLSMDAGF-LDELKGILGRKKLSLPRVFIGGRYVGG 163

Query: 329 AEEIRGLHENGELKKIVDGLPVDEIGVCDNCGGYTFLLCDQCDGSHKLFMEKGGGFRSCF 508
           AEEIR LHE GELKK++ G PV   GVCD CGGY F+LC+ CDGS K++ EK  GFR C 
Sbjct: 164 AEEIRQLHETGELKKLLGGFPV-AAGVCDECGGYRFMLCENCDGSRKVYSEK-TGFRICT 221

Query: 509 VCNENGLIR 535
            CNENGLIR
Sbjct: 222 ACNENGLIR 230


>ref|XP_004143166.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
           gi|449519324|ref|XP_004166685.1| PREDICTED:
           uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 259

 Score =  210 bits (535), Expect = 1e-52
 Identities = 118/222 (53%), Positives = 137/222 (61%), Gaps = 37/222 (16%)
 Frame = +2

Query: 2   ETPKKPS------IFHRVRVATSILRNWTH-----------------------PTTTKPD 94
           E P KP+      +F RVR   S+LR W++                       P +TK  
Sbjct: 37  EPPPKPTSRKASIVFQRVRFVNSLLRAWSNLPSESQSQLRFQPESEPVLKFLDPKSTKSS 96

Query: 95  --PSTQKIG------IVIYFTSLRIVRKTFEDCKTVRSILRSFRVKIDERDLSMDLGFXX 250
             PS  + G      IV+YFTSLR+VR TFEDCKTVRSILR FRV IDERDLSMD GF  
Sbjct: 97  QVPSRSEAGPVSDKRIVVYFTSLRVVRSTFEDCKTVRSILRGFRVSIDERDLSMDSGFVA 156

Query: 251 XXXXXXXXXXXXSLPRVFIGGRYIGGAEEIRGLHENGELKKIVDGLPVDEIGVCDNCGGY 430
                        LP VFIGG YIGGAEEIR LHE GELKK+++GLP  + GVC+ CGGY
Sbjct: 157 ELQQILGKKELP-LPTVFIGGEYIGGAEEIRQLHEIGELKKLIEGLPTADSGVCEVCGGY 215

Query: 431 TFLLCDQCDGSHKLFMEKGGGFRSCFVCNENGLIRCPSCSSS 556
            F+LC+ C+GSHKLF EK  GF++C  CNENGLIRC SCSSS
Sbjct: 216 RFILCEDCNGSHKLFTEK-SGFKTCTTCNENGLIRCHSCSSS 256


>ref|XP_004166739.1| PREDICTED: uncharacterized protein At5g39865-like [Cucumis sativus]
          Length = 247

 Score =  210 bits (534), Expect = 1e-52
 Identities = 108/190 (56%), Positives = 136/190 (71%), Gaps = 8/190 (4%)
 Frame = +2

Query: 5   TPKKPSIFHRVRVATSILRNWTHPTTTKPDPSTQKIG---IVIYFTSLRIVRKTFEDCKT 175
           TPKKPSIFHRVR++TS+LR+W+H        S+++     I++Y TSLR+VR+TFEDC+ 
Sbjct: 51  TPKKPSIFHRVRLSTSVLRSWSHRLAVSSTSSSRRDSDHRIILYHTSLRVVRRTFEDCRV 110

Query: 176 VRSILRSFRVKIDERDLSMDLGFXXXXXXXXXXXXXXSLPRVFIGGRYIGGAEEIRGLHE 355
           VRSILR+ RV IDERDLSMD  F              SLPRVFIGGRYIGG EEI+ ++E
Sbjct: 111 VRSILRTLRVPIDERDLSMDSRF-VDELHDAIGRKSLSLPRVFIGGRYIGGVEEIKLMNE 169

Query: 356 NGELKKIVDGLPVDEIG-----VCDNCGGYTFLLCDQCDGSHKLFMEKGGGFRSCFVCNE 520
           NGELKK+++ LP    G      C+ CGG  F++C++CDGSHK+++EK  GFRSC  CN 
Sbjct: 170 NGELKKLIERLPDVATGPAAAWCCEVCGGIRFVVCEECDGSHKIYIEK-IGFRSCNSCNI 228

Query: 521 NGLIRCPSCS 550
           NGLIRCPSCS
Sbjct: 229 NGLIRCPSCS 238


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