BLASTX nr result

ID: Coptis24_contig00021479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021479
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-...   397   e-108
ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A ...   397   e-108
ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-...   395   e-108
ref|XP_002526467.1| ELMO domain-containing protein, putative [Ri...   395   e-108
ref|XP_003624290.1| ELMO domain-containing protein A [Medicago t...   394   e-107

>ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]
          Length = 266

 Score =  397 bits (1020), Expect = e-108
 Identities = 192/264 (72%), Positives = 218/264 (82%), Gaps = 5/264 (1%)
 Frame = +2

Query: 44  MVDRGGSFVAVRRISQGLERNYGHHSNS-----GSAAWIGKGLSCVCVQTRESDARPSFD 208
           M DRGGSFVAVRRISQGL+R+   HS+S     GS AW+G+GLSCVC Q RESDARPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 209 LTPIQEVCLQKLQRRVEVAYDGSNPEHQESLRALWDVSFPEEELHGLISEQWKEMGWQGK 388
           LTP QE CLQ+LQ R+++ YDGS PEHQ++LRALW  +FPEEELHGLISEQWK MGWQGK
Sbjct: 61  LTPAQEECLQRLQNRIDIPYDGSIPEHQDALRALWSAAFPEEELHGLISEQWKNMGWQGK 120

Query: 389 DPSTDFRGGGFISLENLLFFARTYPESFEDLLRKREGNRALWEYPFAVAGVNITFMLIQM 568
           DPSTDFRGGGFISLENLLFFAR +P+SF+DLLRK+EG+R++WEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 569 LDLEAVKPRTMMGAVFCKLLSANELAFDILYCITFKVMDQQWLDMHASYMDFNTVMKSTX 748
           LDLEAVKPRT++GA F K L+ N+ AFD+LYCITFK+MDQQWL M ASYMDFNTVMKST 
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 749 XXXXXXXXXXXXXXXXDMPSYSLL 820
                           D+PSY LL
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLL 264


>ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]
          Length = 267

 Score =  397 bits (1020), Expect = e-108
 Identities = 200/265 (75%), Positives = 217/265 (81%), Gaps = 6/265 (2%)
 Frame = +2

Query: 44  MVDRGG-SFVAVRRISQGLERNYGHHSNS-----GSAAWIGKGLSCVCVQTRESDARPSF 205
           M DRGG SFVAVRRISQGL+R    HS S     GSAAW+G+GLSCVC Q RESDARPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 206 DLTPIQEVCLQKLQRRVEVAYDGSNPEHQESLRALWDVSFPEEELHGLISEQWKEMGWQG 385
           DLTP QE CLQ+LQ R+EV+YD S  EHQE+LRALW+ SFPEEEL  LISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQG 120

Query: 386 KDPSTDFRGGGFISLENLLFFARTYPESFEDLLRKREGNRALWEYPFAVAGVNITFMLIQ 565
           KDPSTDFRGGGFISLENLLFFAR YP+SF+DLLRK+EG+RALWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQ 180

Query: 566 MLDLEAVKPRTMMGAVFCKLLSANELAFDILYCITFKVMDQQWLDMHASYMDFNTVMKST 745
           MLDLEAVKPR+M GA+F K LS NE AFD+LYCITFK+MD QWL MHASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRSMAGAIFLKFLSENESAFDLLYCITFKLMDNQWLAMHASYMDFNTVMKST 240

Query: 746 XXXXXXXXXXXXXXXXXDMPSYSLL 820
                            D+PSYSLL
Sbjct: 241 RCQLERELLLEDVSRLEDLPSYSLL 265


>ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]
          Length = 266

 Score =  395 bits (1016), Expect = e-108
 Identities = 191/264 (72%), Positives = 219/264 (82%), Gaps = 5/264 (1%)
 Frame = +2

Query: 44  MVDRGGSFVAVRRISQGLERNYGHHSNS-----GSAAWIGKGLSCVCVQTRESDARPSFD 208
           M DRGGSFVAVRRISQGL+R+   HS+S     GS AW+G+GLSCVC Q RESDARPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 209 LTPIQEVCLQKLQRRVEVAYDGSNPEHQESLRALWDVSFPEEELHGLISEQWKEMGWQGK 388
           LTP QE CLQ+LQ R+++ YDGS PEHQ++LR LW+ +FPEEELHGLISEQWK+MGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDIPYDGSVPEHQDALRDLWNAAFPEEELHGLISEQWKDMGWQGK 120

Query: 389 DPSTDFRGGGFISLENLLFFARTYPESFEDLLRKREGNRALWEYPFAVAGVNITFMLIQM 568
           DPSTDFRGGGFISLENLLFFAR +P+SF+DLLRK+EG+R++WEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 569 LDLEAVKPRTMMGAVFCKLLSANELAFDILYCITFKVMDQQWLDMHASYMDFNTVMKSTX 748
           LDLEAVKPRT++GA F K L+ N+ AFD+LYCITFK+MDQQWL M ASYMDFNTVMKST 
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNTVMKSTR 240

Query: 749 XXXXXXXXXXXXXXXXDMPSYSLL 820
                           D+PSY LL
Sbjct: 241 RQLEKELLLEDIMRLEDVPSYKLL 264


>ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis]
           gi|223534142|gb|EEF35858.1| ELMO domain-containing
           protein, putative [Ricinus communis]
          Length = 267

 Score =  395 bits (1016), Expect = e-108
 Identities = 197/265 (74%), Positives = 218/265 (82%), Gaps = 6/265 (2%)
 Frame = +2

Query: 44  MVDRGGSFVAVRRISQGLERNYGH-HSNS-----GSAAWIGKGLSCVCVQTRESDARPSF 205
           M DRGGSFVAVRRISQGLER     HS S     GSAAW+G+GLSCVC Q RESDARPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 206 DLTPIQEVCLQKLQRRVEVAYDGSNPEHQESLRALWDVSFPEEELHGLISEQWKEMGWQG 385
           DLT  QE CLQ+LQ R++VAYD S PEHQE+LRALW+ +FPEEEL GLISEQWKEMGWQG
Sbjct: 61  DLTLTQEECLQRLQSRIDVAYDSSIPEHQEALRALWNAAFPEEELRGLISEQWKEMGWQG 120

Query: 386 KDPSTDFRGGGFISLENLLFFARTYPESFEDLLRKREGNRALWEYPFAVAGVNITFMLIQ 565
           KDPSTDFRGGGFISLENLLFFA+ +P SF+DLL+KREG+R++WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 566 MLDLEAVKPRTMMGAVFCKLLSANELAFDILYCITFKVMDQQWLDMHASYMDFNTVMKST 745
           MLDLEAVKPRTM+GAVF K L+ NE AFD+LYCITFK+MD QWL+MHASYMDFNTVMKST
Sbjct: 181 MLDLEAVKPRTMVGAVFLKFLTENESAFDLLYCITFKLMDHQWLNMHASYMDFNTVMKST 240

Query: 746 XXXXXXXXXXXXXXXXXDMPSYSLL 820
                            D+PSY LL
Sbjct: 241 RRQLERELLLEDITRLEDLPSYGLL 265


>ref|XP_003624290.1| ELMO domain-containing protein A [Medicago truncatula]
           gi|124359479|gb|ABN05917.1| Engulfment and cell
           motility, ELM [Medicago truncatula]
           gi|355499305|gb|AES80508.1| ELMO domain-containing
           protein A [Medicago truncatula]
          Length = 266

 Score =  394 bits (1011), Expect = e-107
 Identities = 192/264 (72%), Positives = 217/264 (82%), Gaps = 5/264 (1%)
 Frame = +2

Query: 44  MVDRGGSFVAVRRISQGLERNYGHHSNS-----GSAAWIGKGLSCVCVQTRESDARPSFD 208
           M DRGGSFVAVRRISQGL+R   +HS+S     GS AWIG+GLSCVC Q RESDAR SFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRGNAYHSSSAEFVTGSTAWIGRGLSCVCAQRRESDARLSFD 60

Query: 209 LTPIQEVCLQKLQRRVEVAYDGSNPEHQESLRALWDVSFPEEELHGLISEQWKEMGWQGK 388
           LTP QE CLQ+LQ R++V YD S PEHQ SLRALW+ +FPEEEL+GLISEQWK+MGWQGK
Sbjct: 61  LTPYQEECLQRLQSRIDVPYDSSIPEHQASLRALWNAAFPEEELNGLISEQWKDMGWQGK 120

Query: 389 DPSTDFRGGGFISLENLLFFARTYPESFEDLLRKREGNRALWEYPFAVAGVNITFMLIQM 568
           DPSTDFRGGG+ISLENLLFFAR +P+SF+DLLRK+EG+R++WEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGYISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 569 LDLEAVKPRTMMGAVFCKLLSANELAFDILYCITFKVMDQQWLDMHASYMDFNTVMKSTX 748
           LDLEAVKPRT++GA F K L+ NE AFD+LYCITFK+MD QWL MHASYMDFNTVMKST 
Sbjct: 181 LDLEAVKPRTLVGATFLKFLAENESAFDLLYCITFKLMDNQWLSMHASYMDFNTVMKSTR 240

Query: 749 XXXXXXXXXXXXXXXXDMPSYSLL 820
                           D+PSY LL
Sbjct: 241 RQLEKELLLEDLTQLEDVPSYKLL 264


Top