BLASTX nr result
ID: Coptis24_contig00021470
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021470 (1140 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ... 212 2e-52 ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ... 212 2e-52 ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2... 194 3e-47 ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2... 184 4e-44 gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P... 184 5e-44 >ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis vinifera] Length = 320 Score = 212 bits (539), Expect = 2e-52 Identities = 135/297 (45%), Positives = 157/297 (52%), Gaps = 20/297 (6%) Frame = +2 Query: 38 YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 217 YALSGKIMLSA HIYARWYL H++F Sbjct: 23 YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 81 Query: 218 XIS-----QGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSFH 382 S +GLDAS+L LP F+Y+S +H D ECAVCLSEFEENEKGR LPKCNHSFH Sbjct: 82 AASVSSPTRGLDASILNSLPVFVYSSKTHT-DMSECAVCLSEFEENEKGRRLPKCNHSFH 140 Query: 383 IGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXXXXXX 562 IGCIDMWFHSHSTCPLCRS V E+ + P ++V+ T+ T + Sbjct: 141 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHDED 200 Query: 563 XXXXXXXXXXXXXXXF-------ELAGVVSIEVPRRNESFKNLEEGSPLGS---QVFKSP 712 ELAG VSIEVPRRNE+F E+ S L S +V KSP Sbjct: 201 RTGRLRTSSSVGSSSVGSRRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSP 259 Query: 713 GGRIRSFKRILSRDRKQPSTPMS----CCSSAAAIEIDLERG-ENEEQAQQASSPTP 868 G RI S KRILSRDRK +P S C S E D+ERG E+ +Q Q + P P Sbjct: 260 GSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 316 >ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis vinifera] Length = 317 Score = 212 bits (539), Expect = 2e-52 Identities = 135/297 (45%), Positives = 157/297 (52%), Gaps = 20/297 (6%) Frame = +2 Query: 38 YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 217 YALSGKIMLSA HIYARWYL H++F Sbjct: 20 YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 78 Query: 218 XIS-----QGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSFH 382 S +GLDAS+L LP F+Y+S +H D ECAVCLSEFEENEKGR LPKCNHSFH Sbjct: 79 AASVSSPTRGLDASILNSLPVFVYSSKTHT-DMSECAVCLSEFEENEKGRRLPKCNHSFH 137 Query: 383 IGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXXXXXX 562 IGCIDMWFHSHSTCPLCRS V E+ + P ++V+ T+ T + Sbjct: 138 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHDED 197 Query: 563 XXXXXXXXXXXXXXXF-------ELAGVVSIEVPRRNESFKNLEEGSPLGS---QVFKSP 712 ELAG VSIEVPRRNE+F E+ S L S +V KSP Sbjct: 198 RTGRLRTSSSVGSSSVGSRRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSP 256 Query: 713 GGRIRSFKRILSRDRKQPSTPMS----CCSSAAAIEIDLERG-ENEEQAQQASSPTP 868 G RI S KRILSRDRK +P S C S E D+ERG E+ +Q Q + P P Sbjct: 257 GSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 313 >ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1| predicted protein [Populus trichocarpa] Length = 273 Score = 194 bits (493), Expect = 3e-47 Identities = 115/278 (41%), Positives = 152/278 (54%), Gaps = 12/278 (4%) Frame = +2 Query: 38 YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 217 +ALSGKIMLSA H YARWYL H++F Sbjct: 1 FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRRNHLVFYVDSAHN 60 Query: 218 X------ISQGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSF 379 +++GL+ ++LK LP F+Y+ +H+ D++ECAVCLSEF+ENE GR LPKCNHSF Sbjct: 61 PTIVTTQVTRGLEETVLKSLPVFVYSEKTHQ-DSMECAVCLSEFQENETGRTLPKCNHSF 119 Query: 380 HIGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXXXXX 559 HIGCIDMWFHSHSTCPLCRSPV P EN Q + P + + S + Sbjct: 120 HIGCIDMWFHSHSTCPLCRSPVE-PVTENPVQDGPGYGISVPGS---GSSSGTMCQHEED 175 Query: 560 XXXXXXXXXXXXXXXXFELAGVVSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRIRSFK 736 EL G V+IEVPRRN +F++ SP S F+SP R+ SFK Sbjct: 176 RVGSASTSSFNDRRKQMELIG-VTIEVPRRNGNFEDESNTESPSASHAFRSPMSRMLSFK 234 Query: 737 RILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENE 835 R+LSR+R+ ++P +SC + E+D+ERG++E Sbjct: 235 RMLSRERRGTASPNVATSVSCGGESGTTEMDVERGQDE 272 >ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1| predicted protein [Populus trichocarpa] Length = 293 Score = 184 bits (467), Expect = 4e-44 Identities = 112/287 (39%), Positives = 148/287 (51%), Gaps = 13/287 (4%) Frame = +2 Query: 29 QEKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXX 208 +E YALSGKIMLSA H+YARWYL H++F Sbjct: 13 REGYALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDS 72 Query: 209 XXXX------ISQGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCN 370 +++GL+ ++ LP F+Y+ +H+ D++ECAVCLSEFEENE+GR+LPKCN Sbjct: 73 AQDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQ-DSIECAVCLSEFEENERGRVLPKCN 131 Query: 371 HSFHIGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXX 550 HSFH CIDMWFHSHSTCPLCRSPV P EN V N E S + Sbjct: 132 HSFHTECIDMWFHSHSTCPLCRSPVE-PVAENP-------VPEGSNFGISEAGSGLCTSC 183 Query: 551 XXXXXXXXXXXXXXXXXXXFELAGV-VSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRI 724 + + V+I+VPRRN +F++ SP S F+SP R+ Sbjct: 184 QHEEDHVGSASTSSFNDGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRM 243 Query: 725 RSFKRILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENEEQAQQ 850 SFKR+LSR+R+ +P +SC + E D+E G +E QQ Sbjct: 244 LSFKRMLSRERRGTVSPTVANSVSCGGGSGTTEFDIEHGRDESMPQQ 290 >gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba] Length = 293 Score = 184 bits (466), Expect = 5e-44 Identities = 112/287 (39%), Positives = 148/287 (51%), Gaps = 13/287 (4%) Frame = +2 Query: 29 QEKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXX 208 +E YALSGKIMLSA H+YARWYL H++F Sbjct: 13 REGYALSGKIMLSAILILFFVIIVMVLLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDS 72 Query: 209 XXXX------ISQGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCN 370 +++GL+ ++ LP F+Y +H+ D++ECAVCLSEFEENE+GR+LPKCN Sbjct: 73 PQNPNNVTSHVTRGLEETVKNSLPVFVYPRKTHQ-DSIECAVCLSEFEENERGRVLPKCN 131 Query: 371 HSFHIGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXX 550 HSFH CIDMWFHSHSTCPLCRSPV P EN V N E S + Sbjct: 132 HSFHTECIDMWFHSHSTCPLCRSPVE-PVAENP-------VPEGSNFGISEAGSGLCTSC 183 Query: 551 XXXXXXXXXXXXXXXXXXXFELAGV-VSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRI 724 + + V+I+VPRRN +F++ SP S F+SP R+ Sbjct: 184 QHEEDHLGSASTSSFNGGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRM 243 Query: 725 RSFKRILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENEEQAQQ 850 SFKR+LSR+R+ +P +SC + E D+E+G +E QQ Sbjct: 244 LSFKRMLSRERRGTVSPTVANSVSCGGGSGTTEFDIEQGRDESMPQQ 290