BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021470
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...   212   2e-52
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...   212   2e-52
ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   184   4e-44
gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P...   184   5e-44

>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score =  212 bits (539), Expect = 2e-52
 Identities = 135/297 (45%), Positives = 157/297 (52%), Gaps = 20/297 (6%)
 Frame = +2

Query: 38  YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 217
           YALSGKIMLSA              HIYARWYL                H++F       
Sbjct: 23  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 81

Query: 218 XIS-----QGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSFH 382
             S     +GLDAS+L  LP F+Y+S +H  D  ECAVCLSEFEENEKGR LPKCNHSFH
Sbjct: 82  AASVSSPTRGLDASILNSLPVFVYSSKTHT-DMSECAVCLSEFEENEKGRRLPKCNHSFH 140

Query: 383 IGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXXXXXX 562
           IGCIDMWFHSHSTCPLCRS V     E+  + P ++V+    T+   T +          
Sbjct: 141 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHDED 200

Query: 563 XXXXXXXXXXXXXXXF-------ELAGVVSIEVPRRNESFKNLEEGSPLGS---QVFKSP 712
                                  ELAG VSIEVPRRNE+F   E+ S L S   +V KSP
Sbjct: 201 RTGRLRTSSSVGSSSVGSRRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSP 259

Query: 713 GGRIRSFKRILSRDRKQPSTPMS----CCSSAAAIEIDLERG-ENEEQAQQASSPTP 868
           G RI S KRILSRDRK   +P S     C S    E D+ERG E+ +Q Q  + P P
Sbjct: 260 GSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 316


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score =  212 bits (539), Expect = 2e-52
 Identities = 135/297 (45%), Positives = 157/297 (52%), Gaps = 20/297 (6%)
 Frame = +2

Query: 38  YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 217
           YALSGKIMLSA              HIYARWYL                H++F       
Sbjct: 20  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 78

Query: 218 XIS-----QGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSFH 382
             S     +GLDAS+L  LP F+Y+S +H  D  ECAVCLSEFEENEKGR LPKCNHSFH
Sbjct: 79  AASVSSPTRGLDASILNSLPVFVYSSKTHT-DMSECAVCLSEFEENEKGRRLPKCNHSFH 137

Query: 383 IGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXXXXXX 562
           IGCIDMWFHSHSTCPLCRS V     E+  + P ++V+    T+   T +          
Sbjct: 138 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHDED 197

Query: 563 XXXXXXXXXXXXXXXF-------ELAGVVSIEVPRRNESFKNLEEGSPLGS---QVFKSP 712
                                  ELAG VSIEVPRRNE+F   E+ S L S   +V KSP
Sbjct: 198 RTGRLRTSSSVGSSSVGSRRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSP 256

Query: 713 GGRIRSFKRILSRDRKQPSTPMS----CCSSAAAIEIDLERG-ENEEQAQQASSPTP 868
           G RI S KRILSRDRK   +P S     C S    E D+ERG E+ +Q Q  + P P
Sbjct: 257 GSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 313


>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  194 bits (493), Expect = 3e-47
 Identities = 115/278 (41%), Positives = 152/278 (54%), Gaps = 12/278 (4%)
 Frame = +2

Query: 38  YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 217
           +ALSGKIMLSA              H YARWYL                H++F       
Sbjct: 1   FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRRNHLVFYVDSAHN 60

Query: 218 X------ISQGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSF 379
                  +++GL+ ++LK LP F+Y+  +H+ D++ECAVCLSEF+ENE GR LPKCNHSF
Sbjct: 61  PTIVTTQVTRGLEETVLKSLPVFVYSEKTHQ-DSMECAVCLSEFQENETGRTLPKCNHSF 119

Query: 380 HIGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXXXXX 559
           HIGCIDMWFHSHSTCPLCRSPV  P  EN  Q      +  P +    + S  +      
Sbjct: 120 HIGCIDMWFHSHSTCPLCRSPVE-PVTENPVQDGPGYGISVPGS---GSSSGTMCQHEED 175

Query: 560 XXXXXXXXXXXXXXXXFELAGVVSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRIRSFK 736
                            EL G V+IEVPRRN +F++     SP  S  F+SP  R+ SFK
Sbjct: 176 RVGSASTSSFNDRRKQMELIG-VTIEVPRRNGNFEDESNTESPSASHAFRSPMSRMLSFK 234

Query: 737 RILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENE 835
           R+LSR+R+  ++P     +SC   +   E+D+ERG++E
Sbjct: 235 RMLSRERRGTASPNVATSVSCGGESGTTEMDVERGQDE 272


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  184 bits (467), Expect = 4e-44
 Identities = 112/287 (39%), Positives = 148/287 (51%), Gaps = 13/287 (4%)
 Frame = +2

Query: 29  QEKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXX 208
           +E YALSGKIMLSA              H+YARWYL                H++F    
Sbjct: 13  REGYALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDS 72

Query: 209 XXXX------ISQGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCN 370
                     +++GL+ ++   LP F+Y+  +H+ D++ECAVCLSEFEENE+GR+LPKCN
Sbjct: 73  AQDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQ-DSIECAVCLSEFEENERGRVLPKCN 131

Query: 371 HSFHIGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXX 550
           HSFH  CIDMWFHSHSTCPLCRSPV  P  EN        V    N    E  S +    
Sbjct: 132 HSFHTECIDMWFHSHSTCPLCRSPVE-PVAENP-------VPEGSNFGISEAGSGLCTSC 183

Query: 551 XXXXXXXXXXXXXXXXXXXFELAGV-VSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRI 724
                                +  + V+I+VPRRN +F++     SP  S  F+SP  R+
Sbjct: 184 QHEEDHVGSASTSSFNDGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRM 243

Query: 725 RSFKRILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENEEQAQQ 850
            SFKR+LSR+R+   +P     +SC   +   E D+E G +E   QQ
Sbjct: 244 LSFKRMLSRERRGTVSPTVANSVSCGGGSGTTEFDIEHGRDESMPQQ 290


>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
          Length = 293

 Score =  184 bits (466), Expect = 5e-44
 Identities = 112/287 (39%), Positives = 148/287 (51%), Gaps = 13/287 (4%)
 Frame = +2

Query: 29  QEKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXX 208
           +E YALSGKIMLSA              H+YARWYL                H++F    
Sbjct: 13  REGYALSGKIMLSAILILFFVIIVMVLLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDS 72

Query: 209 XXXX------ISQGLDASLLKYLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCN 370
                     +++GL+ ++   LP F+Y   +H+ D++ECAVCLSEFEENE+GR+LPKCN
Sbjct: 73  PQNPNNVTSHVTRGLEETVKNSLPVFVYPRKTHQ-DSIECAVCLSEFEENERGRVLPKCN 131

Query: 371 HSFHIGCIDMWFHSHSTCPLCRSPVTIPEPENTRQTPLEIVVHSPNTQQPETPSSILXXX 550
           HSFH  CIDMWFHSHSTCPLCRSPV  P  EN        V    N    E  S +    
Sbjct: 132 HSFHTECIDMWFHSHSTCPLCRSPVE-PVAENP-------VPEGSNFGISEAGSGLCTSC 183

Query: 551 XXXXXXXXXXXXXXXXXXXFELAGV-VSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRI 724
                                +  + V+I+VPRRN +F++     SP  S  F+SP  R+
Sbjct: 184 QHEEDHLGSASTSSFNGGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRM 243

Query: 725 RSFKRILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENEEQAQQ 850
            SFKR+LSR+R+   +P     +SC   +   E D+E+G +E   QQ
Sbjct: 244 LSFKRMLSRERRGTVSPTVANSVSCGGGSGTTEFDIEQGRDESMPQQ 290