BLASTX nr result

ID: Coptis24_contig00021466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021466
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis ...   154   1e-35
ref|XP_002868407.1| predicted protein [Arabidopsis lyrata subsp....   154   1e-35
ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis tha...   154   1e-35
gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|221363...   154   1e-35
ref|XP_003546608.1| PREDICTED: transmembrane 9 superfamily membe...   154   1e-35

>ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|10176814|dbj|BAB10022.1| endosomal protein-like
           [Arabidopsis thaliana] gi|332006552|gb|AED93935.1|
           endomembrane family protein 70 [Arabidopsis thaliana]
          Length = 658

 Score =  154 bits (389), Expect = 1e-35
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = +2

Query: 2   WWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 181
           WWKSFFASGSVAIYIF+YS+NYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL
Sbjct: 583 WWKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 642

Query: 182 SSFWFVHYLFSSVKLD 229
           SSFWFVHYLFSSVKLD
Sbjct: 643 SSFWFVHYLFSSVKLD 658


>ref|XP_002868407.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314243|gb|EFH44666.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 630

 Score =  154 bits (389), Expect = 1e-35
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = +2

Query: 2   WWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 181
           WWKSFFASGSVAIYIF+YS+NYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL
Sbjct: 555 WWKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 614

Query: 182 SSFWFVHYLFSSVKLD 229
           SSFWFVHYLFSSVKLD
Sbjct: 615 SSFWFVHYLFSSVKLD 630


>ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|332006551|gb|AED93934.1| endomembrane family protein
           70 [Arabidopsis thaliana]
          Length = 630

 Score =  154 bits (389), Expect = 1e-35
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = +2

Query: 2   WWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 181
           WWKSFFASGSVAIYIF+YS+NYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL
Sbjct: 555 WWKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 614

Query: 182 SSFWFVHYLFSSVKLD 229
           SSFWFVHYLFSSVKLD
Sbjct: 615 SSFWFVHYLFSSVKLD 630


>gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|22136376|gb|AAM91266.1|
           putative protein [Arabidopsis thaliana]
          Length = 425

 Score =  154 bits (389), Expect = 1e-35
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = +2

Query: 2   WWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 181
           WWKSFFASGSVAIYIF+YS+NYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL
Sbjct: 350 WWKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 409

Query: 182 SSFWFVHYLFSSVKLD 229
           SSFWFVHYLFSSVKLD
Sbjct: 410 SSFWFVHYLFSSVKLD 425


>ref|XP_003546608.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 660

 Score =  154 bits (388), Expect = 1e-35
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = +2

Query: 2   WWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLATGTVGFL 181
           WWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIML+TGT+GFL
Sbjct: 585 WWKSFFASGSVAIYIFLYSVNYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLSTGTIGFL 644

Query: 182 SSFWFVHYLFSSVKLD 229
           SSFWFVHYLFSSVKLD
Sbjct: 645 SSFWFVHYLFSSVKLD 660


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