BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021454
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu...   147   2e-33
ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica...   145   6e-33
emb|CBI26949.3| unnamed protein product [Vitis vinifera]              139   3e-31
dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare]    130   3e-28
tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea m...   129   4e-28

>ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1172

 Score =  147 bits (371), Expect = 2e-33
 Identities = 91/207 (43%), Positives = 129/207 (62%), Gaps = 22/207 (10%)
 Frame = -3

Query: 557 MKEKSPSATLYVPPHQRLKSIVVS---SKSNATSSPTHSPLHLNNNNSVIKPSPCIPLPH 387
           MK++ PS+ +YVPPHQRL+S++     +  +A SS   +  H +N ++V+  SP   +P+
Sbjct: 1   MKDRPPSS-VYVPPHQRLRSVITKPSYTSGSAASSVGDNLNHNHNRSAVLNGSP---VPY 56

Query: 386 FPQQEKQQRKRSWEDDNNN------------VEKEYDIFMETSNFV-------SPREWKC 264
           F QQ  QQ+   + D N +             E+  D  ME+S  +       + +EWK 
Sbjct: 57  FQQQ--QQQGNGFVDKNISNYKFISAYGDGVFEEGSDREMESSTVLPGASLSDNIQEWKW 114

Query: 263 KINMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANYRFDL 84
           K+ ML R++ +QE+V +DKKDR DF++IA  A+ +GLYSQ Y K VV SK+ L NYRFDL
Sbjct: 115 KLTMLLRDKEKQELVSRDKKDRRDFDQIAALASGMGLYSQLYVKVVVFSKIPLPNYRFDL 174

Query: 83  DDRRPQREVITKLGLQRRVDALLIEYM 3
           DD+RPQREV   LGLQ+RVDA L EY+
Sbjct: 175 DDKRPQREVNLPLGLQKRVDAYLGEYL 201


>ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1195

 Score =  145 bits (366), Expect = 6e-33
 Identities = 91/207 (43%), Positives = 125/207 (60%), Gaps = 13/207 (6%)
 Frame = -3

Query: 584 LKISSNPPT---MKEKSPSATL--YVPPHQRLKSIVVSSKSNATSSPTHSPLHLNNNNSV 420
           LK S+ PP    MK++ P + +  Y+PPH RL+S V SS S   ++ +      ++  ++
Sbjct: 15  LKPSAPPPLHILMKDRPPPSCVSRYIPPHHRLRSAVTSSASPNLNAASLDSTSRDHQGTL 74

Query: 419 IKPSPCIPLPHFPQQEKQQRKRSWEDD--NNNVEKEYDIFMETSNFVSPR------EWKC 264
           + P     LPH   Q+ QQ+  S  D       E+  D  +E+S+           EWK 
Sbjct: 75  LNPRNT-SLPHSQPQKLQQKDNSLYDFLYEEVSEEGSDREIESSSHGGASAPDTIDEWKW 133

Query: 263 KINMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANYRFDL 84
           K  ML RN+++QE+V ++KKDR DFE+IA+ A+++GLYS  Y K VV SKV L NYRFDL
Sbjct: 134 KFTMLLRNKDKQELVSREKKDRRDFEQIAILASRMGLYSHLYVKVVVFSKVPLPNYRFDL 193

Query: 83  DDRRPQREVITKLGLQRRVDALLIEYM 3
           DDRRPQREVI  LGL RRV+A L EY+
Sbjct: 194 DDRRPQREVILPLGLDRRVEAHLEEYL 220


>emb|CBI26949.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  139 bits (351), Expect = 3e-31
 Identities = 85/207 (41%), Positives = 119/207 (57%), Gaps = 22/207 (10%)
 Frame = -3

Query: 557 MKEKSPSATL--YVPPHQRLKSIVVSSKSNATSSPTHSPLHLNNNNSVIKPSPCIPLPHF 384
           MK++ P + +  Y+PPH RL+S V SS S   ++ +      ++  +++ P     LPH 
Sbjct: 1   MKDRPPPSCVSRYIPPHHRLRSAVTSSASPNLNAASLDSTSRDHQGTLLNPRNT-SLPHS 59

Query: 383 PQQEKQQRKRSW-----------------EDDNNNVEKEYDIFMETSNFVSPR---EWKC 264
             Q+ QQ+  S                  E  ++ V   + +  E     +P    EWK 
Sbjct: 60  QPQKLQQKDNSLYDFLYEEVSEEGSDREIESSSHGVSLIHLLVCEFGGASAPDTIDEWKW 119

Query: 263 KINMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANYRFDL 84
           K  ML RN+++QE+V ++KKDR DFE+IA+ A+++GLYS  Y K VV SKV L NYRFDL
Sbjct: 120 KFTMLLRNKDKQELVSREKKDRRDFEQIAILASRMGLYSHLYVKVVVFSKVPLPNYRFDL 179

Query: 83  DDRRPQREVITKLGLQRRVDALLIEYM 3
           DDRRPQREVI  LGL RRV+A L EY+
Sbjct: 180 DDRRPQREVILPLGLDRRVEAHLEEYL 206


>dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1247

 Score =  130 bits (326), Expect = 3e-28
 Identities = 80/221 (36%), Positives = 121/221 (54%), Gaps = 30/221 (13%)
 Frame = -3

Query: 575 SSNPPTMKEKSPSATL-----YVPPHQRLKSIVVSSKSNATSSPTHSPLHLNN----NNS 423
           ++N P +   S +A +     YVPP +RL+S++ S+  N    P   P    +      S
Sbjct: 39  TTNSPNLSSPSGAAAMSTSGVYVPPMRRLRSVIASTNGNLAPPPAVQPAWTPDWRADGRS 98

Query: 422 VIKPSPCIPL--------PHFPQQEKQQRKRSW-----------EDDNNNVEKEYDIFME 300
           +  PSP  P         P  P Q +  R++S            E+D++       +  +
Sbjct: 99  LSPPSPPQPQQRRAAQLPPRPPPQTQPLRQQSAGYSRYAYDDFSEEDSDREMDRTSVSSK 158

Query: 299 --TSNFVSPREWKCKINMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAV 126
              S   +  EWK K++ML RN+NEQE++ ++KKDR DF+++A  A ++GL+S++Y + +
Sbjct: 159 GGASTLENVDEWKWKLHMLLRNDNEQEIMSREKKDRRDFDQLAQLADRMGLHSRQYSRII 218

Query: 125 VVSKVQLANYRFDLDDRRPQREVITKLGLQRRVDALLIEYM 3
           V SKV L NYR DLDD+RPQREV    GLQR VDALL +Y+
Sbjct: 219 VFSKVPLPNYRSDLDDKRPQREVSIPSGLQREVDALLADYL 259


>tpg|DAA53732.1| TPA: hypothetical protein ZEAMMB73_195625 [Zea mays]
          Length = 1381

 Score =  129 bits (325), Expect = 4e-28
 Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 26/216 (12%)
 Frame = -3

Query: 572 SNPPTMKEKSPSATLYVPPHQRLKSIVVSSKSNATSSP--------THSPLHLNNNNSV- 420
           S+PP     S +  +YVPP +RL+S++ S+  +    P        T +P  L +  S+ 
Sbjct: 186 SSPPVSAAMSTTG-VYVPPMRRLRSVIASTNGSLAPPPSAAAQAQQTRTPEWLVDGRSLS 244

Query: 419 -----------IKPSPCIPLP-HFPQQEKQQRKRSWED-DNNNVEKEYDIFMETSNFVSP 279
                      I P P  PLP H+ QQ     + +++D   ++ +K+ D    +S   S 
Sbjct: 245 PQSPPQLRRRDIPPLPRPPLPEHYRQQSAGFARYAYDDFSEDDSDKDIDRTSVSSKGAST 304

Query: 278 R----EWKCKINMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKV 111
                EWK K++ML RN++EQE++ +++KDR DFE++A  A ++ L+S++Y + VV SKV
Sbjct: 305 LDNVDEWKWKLHMLLRNDDEQEIISRERKDRRDFEQLAQLADRMRLHSRQYSRVVVFSKV 364

Query: 110 QLANYRFDLDDRRPQREVITKLGLQRRVDALLIEYM 3
            L NYR DLDD+RPQREV    GLQR VDALL  Y+
Sbjct: 365 PLPNYRSDLDDKRPQREVSIPAGLQREVDALLAGYV 400