BLASTX nr result
ID: Coptis24_contig00021450
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021450 (766 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi... 165 1e-38 emb|CBI29756.3| unnamed protein product [Vitis vinifera] 155 7e-36 ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like... 155 7e-36 ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like... 127 3e-27 ref|XP_002303150.1| predicted protein [Populus trichocarpa] gi|2... 119 5e-25 >ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis] gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis] Length = 1233 Score = 165 bits (417), Expect = 1e-38 Identities = 88/176 (50%), Positives = 118/176 (67%), Gaps = 2/176 (1%) Frame = +3 Query: 3 GNTTLKNISKRVPRTREELLEISGIGKAKLNKYGDRVLETIESTLRGYYGADMKSSSGSD 182 GN TL+++SKR+PRT+EELLEI+GIGKAK++KYGDR+LETIEST++ YY D SSS + Sbjct: 1060 GNATLQHLSKRIPRTKEELLEINGIGKAKVSKYGDRLLETIESTIKEYYKTDKNSSSSNG 1119 Query: 183 NTEVTKRRRDSVGIMNSGSKEDDDFIDSNGISKKRATKDCLTAKEGKDDYVS-PNNEERC 359 + + KRRRD+ N ++E DDF S G SKKR K + D Y S N +C Sbjct: 1120 SNDSVKRRRDASRAPNGNAEEADDFTKSTGRSKKRVAK---LQNKDTDIYTSRETNNSQC 1176 Query: 360 VDSDLDWDDS-ENVDIKGSDLNASRNENGRVLPSWSTRGNRGGVRARNLYEENAFK 524 +D DLD++DS + + GS + A +N+ GRVLPSWST GN+ NLY++ A K Sbjct: 1177 LDDDLDFEDSCHDFETNGSAIEAGKNDAGRVLPSWSTPGNKVKSSIPNLYQQYATK 1232 >emb|CBI29756.3| unnamed protein product [Vitis vinifera] Length = 1235 Score = 155 bits (393), Expect = 7e-36 Identities = 86/179 (48%), Positives = 119/179 (66%), Gaps = 5/179 (2%) Frame = +3 Query: 3 GNTTLKNISKRVPRTREELLEISGIGKAKLNKYGDRVLETIESTLRGYYGADMKSSSGSD 182 GN TL+ ISKR+PRT+EELLE++GIGKAK++KYGDRVLETIEST++ YY D SSS +D Sbjct: 1036 GNATLQQISKRIPRTKEELLEVNGIGKAKISKYGDRVLETIESTIKEYYKTDKNSSSSND 1095 Query: 183 NTEVTKRRRDSVGIMNSGSKEDDDFIDSNGISKKRATKDCLTAKEGKD----DYVSPNNE 350 +T+ KRRR+S ++++ + EDDDF S S+ RA K E + DY + Sbjct: 1096 STDTIKRRRESAKVLDA-NPEDDDFTKSTDRSRGRAMKRHNKGGEANNTRETDYYN---- 1150 Query: 351 ERCVDSDLDWDDSE-NVDIKGSDLNASRNENGRVLPSWSTRGNRGGVRARNLYEENAFK 524 +C+D DLD+DD+ +V I GS R+ R LPSWST N+G + N+++E +FK Sbjct: 1151 -QCIDDDLDFDDANCDVAINGSAPKVDRDGARRTLPSWSTPSNKGHDQHLNMFQEYSFK 1208 >ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera] Length = 1224 Score = 155 bits (393), Expect = 7e-36 Identities = 86/179 (48%), Positives = 119/179 (66%), Gaps = 5/179 (2%) Frame = +3 Query: 3 GNTTLKNISKRVPRTREELLEISGIGKAKLNKYGDRVLETIESTLRGYYGADMKSSSGSD 182 GN TL+ ISKR+PRT+EELLE++GIGKAK++KYGDRVLETIEST++ YY D SSS +D Sbjct: 1025 GNATLQQISKRIPRTKEELLEVNGIGKAKISKYGDRVLETIESTIKEYYKTDKNSSSSND 1084 Query: 183 NTEVTKRRRDSVGIMNSGSKEDDDFIDSNGISKKRATKDCLTAKEGKD----DYVSPNNE 350 +T+ KRRR+S ++++ + EDDDF S S+ RA K E + DY + Sbjct: 1085 STDTIKRRRESAKVLDA-NPEDDDFTKSTDRSRGRAMKRHNKGGEANNTRETDYYN---- 1139 Query: 351 ERCVDSDLDWDDSE-NVDIKGSDLNASRNENGRVLPSWSTRGNRGGVRARNLYEENAFK 524 +C+D DLD+DD+ +V I GS R+ R LPSWST N+G + N+++E +FK Sbjct: 1140 -QCIDDDLDFDDANCDVAINGSAPKVDRDGARRTLPSWSTPSNKGHDQHLNMFQEYSFK 1197 >ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial [Cucumis sativus] gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial [Cucumis sativus] Length = 1269 Score = 127 bits (319), Expect = 3e-27 Identities = 72/161 (44%), Positives = 106/161 (65%), Gaps = 7/161 (4%) Frame = +3 Query: 3 GNTTLKNISKRVPRTREELLEISGIGKAKLNKYGDRVLETIESTLRGYYGADMKSSSGSD 182 GN TL+ IS+RVPR++EELL+I+GIGKAK++KYGDR+LETIEST++ +YGA S+ +D Sbjct: 1117 GNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSND 1176 Query: 183 NTEVTKRRRDSVGIMNSGSKEDDDFIDSNGISKK-RATKDCLTAKEGKDDYV----SPNN 347 + + KRRR G+K+ D+++D N +K +K T + KD V P + Sbjct: 1177 SNDSGKRRR-------GGNKDKDEYLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEH 1229 Query: 348 EERCVDSDLDWDDSENVDIKGSDL--NASRNENGRVLPSWS 464 ++ DS+LD+DDS + +I+ +L N +GRVLPSWS Sbjct: 1230 PDQFFDSELDFDDS-HYEIRDLELNNNLDHGNDGRVLPSWS 1269 >ref|XP_002303150.1| predicted protein [Populus trichocarpa] gi|222840582|gb|EEE78129.1| predicted protein [Populus trichocarpa] Length = 464 Score = 119 bits (299), Expect = 5e-25 Identities = 63/129 (48%), Positives = 88/129 (68%) Frame = +3 Query: 3 GNTTLKNISKRVPRTREELLEISGIGKAKLNKYGDRVLETIESTLRGYYGADMKSSSGSD 182 GN TL+++SKR+PRT+EELLEI+GIGKAK++KYGDRVLETIEST+R Y D SS ++ Sbjct: 329 GNATLQHMSKRIPRTKEELLEINGIGKAKVSKYGDRVLETIESTIREYNKGDRNSSGSNE 388 Query: 183 NTEVTKRRRDSVGIMNSGSKEDDDFIDSNGISKKRATKDCLTAKEGKDDYVSPNNEERCV 362 +++ KRRRD+ +N +E+D+F S G SKKR E + + P + + + Sbjct: 389 SSDSIKRRRDASKALNGNMEEEDEFTKSTGRSKKRTATRQNKGSEVHNS-MEPVSCNQFL 447 Query: 363 DSDLDWDDS 389 D DLD+ DS Sbjct: 448 DDDLDFKDS 456