BLASTX nr result

ID: Coptis24_contig00021429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021429
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172498.1| PREDICTED: probable tRNA (guanine(26)-N(2))-...   139   2e-31
ref|XP_004141471.1| PREDICTED: probable tRNA (guanine(26)-N(2))-...   139   2e-31
ref|XP_002525911.1| N(2),N(2)-dimethylguanosine tRNA methyltrans...   137   7e-31
ref|XP_003554958.1| PREDICTED: probable N(2),N(2)-dimethylguanos...   137   1e-30
ref|XP_003554957.1| PREDICTED: probable N(2),N(2)-dimethylguanos...   137   1e-30

>ref|XP_004172498.1| PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase
           2-like, partial [Cucumis sativus]
          Length = 340

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/109 (69%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 SPSVFLDSAVQSVADGGILMCTATDLAVLCGG---LLLQVWFLSPKR*ILSRDGS-EDLL 150
           SPS+FLDSAVQSV DGG+LMCTATD+AVLCGG   +    +   P R     + +   LL
Sbjct: 212 SPSIFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILL 271

Query: 149 ACIESHANRYKRYIVPILSVQMDFYVRVFVRIFTSASAMKNALLKLSYV 3
           ACIESHANRYKRYIVP+LSVQMDFYVRVFVR++TSASAMKN  LKLSYV
Sbjct: 272 ACIESHANRYKRYIVPVLSVQMDFYVRVFVRVYTSASAMKNTPLKLSYV 320


>ref|XP_004141471.1| PREDICTED: probable tRNA (guanine(26)-N(2))-dimethyltransferase
           2-like [Cucumis sativus]
          Length = 581

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/109 (69%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 SPSVFLDSAVQSVADGGILMCTATDLAVLCGG---LLLQVWFLSPKR*ILSRDGS-EDLL 150
           SPS+FLDSAVQSV DGG+LMCTATD+AVLCGG   +    +   P R     + +   LL
Sbjct: 212 SPSIFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILL 271

Query: 149 ACIESHANRYKRYIVPILSVQMDFYVRVFVRIFTSASAMKNALLKLSYV 3
           ACIESHANRYKRYIVP+LSVQMDFYVRVFVR++TSASAMKN  LKLSYV
Sbjct: 272 ACIESHANRYKRYIVPVLSVQMDFYVRVFVRVYTSASAMKNTPLKLSYV 320


>ref|XP_002525911.1| N(2),N(2)-dimethylguanosine tRNA methyltransferase, putative
           [Ricinus communis] gi|223534740|gb|EEF36431.1|
           N(2),N(2)-dimethylguanosine tRNA methyltransferase,
           putative [Ricinus communis]
          Length = 542

 Score =  137 bits (346), Expect = 7e-31
 Identities = 74/109 (67%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 SPSVFLDSAVQSVADGGILMCTATDLAVLCGG---LLLQVWFLSPKR*ILSRDGS-EDLL 150
           SPS+FLDSAVQSV DGG+LMCTATD+AVLCGG   +    +   P R     + +   LL
Sbjct: 241 SPSIFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILL 300

Query: 149 ACIESHANRYKRYIVPILSVQMDFYVRVFVRIFTSASAMKNALLKLSYV 3
           ACIESHANRYKRYI+P+LSV+MDFYVRVFVR++TSASAMKN  LKLSYV
Sbjct: 301 ACIESHANRYKRYIIPVLSVRMDFYVRVFVRVYTSASAMKNTPLKLSYV 349


>ref|XP_003554958.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like isoform 2 [Glycine max]
          Length = 645

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 SPSVFLDSAVQSVADGGILMCTATDLAVLCGG---LLLQVWFLSPKR*ILSRDGS-EDLL 150
           SPS+FLDSAVQSV DGG+LMCTATD+AVLCGG   +    +   P R     + +   +L
Sbjct: 278 SPSMFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRIVL 337

Query: 149 ACIESHANRYKRYIVPILSVQMDFYVRVFVRIFTSASAMKNALLKLSYV 3
           ACIESHANRYKRYIVP+LSVQMDFY+RVFVRI+TSASAMKN  LKLSYV
Sbjct: 338 ACIESHANRYKRYIVPVLSVQMDFYLRVFVRIYTSASAMKNTPLKLSYV 386


>ref|XP_003554957.1| PREDICTED: probable N(2),N(2)-dimethylguanosine tRNA
           methyltransferase 1-like isoform 1 [Glycine max]
          Length = 638

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 SPSVFLDSAVQSVADGGILMCTATDLAVLCGG---LLLQVWFLSPKR*ILSRDGS-EDLL 150
           SPS+FLDSAVQSV DGG+LMCTATD+AVLCGG   +    +   P R     + +   +L
Sbjct: 271 SPSMFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRIVL 330

Query: 149 ACIESHANRYKRYIVPILSVQMDFYVRVFVRIFTSASAMKNALLKLSYV 3
           ACIESHANRYKRYIVP+LSVQMDFY+RVFVRI+TSASAMKN  LKLSYV
Sbjct: 331 ACIESHANRYKRYIVPVLSVQMDFYLRVFVRIYTSASAMKNTPLKLSYV 379


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