BLASTX nr result
ID: Coptis24_contig00021424
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021424 (766 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516716.1| multidrug resistance pump, putative [Ricinus... 55 3e-07 ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like... 52 3e-06 >ref|XP_002516716.1| multidrug resistance pump, putative [Ricinus communis] gi|223544211|gb|EEF45735.1| multidrug resistance pump, putative [Ricinus communis] Length = 313 Score = 55.1 bits (131), Expect(2) = 3e-07 Identities = 26/49 (53%), Positives = 30/49 (61%) Frame = -3 Query: 191 SAWASEVFLDQENIPCEWWALLVGWELRQLWSLCGAYIIFSILNMMLSF 45 S+ A E FL+Q +P WW LV WE R LW L A I+ SI N MLSF Sbjct: 23 SSSAIEEFLEQRTLPIRWWPRLVAWESRILWFLSAASIVASIFNFMLSF 71 Score = 25.8 bits (55), Expect(2) = 3e-07 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -1 Query: 49 VFVGHIGDSEFAGASM 2 +FVGH+G E AGAS+ Sbjct: 75 MFVGHLGSVELAGASV 90 >ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max] Length = 505 Score = 51.6 bits (122), Expect(2) = 3e-06 Identities = 25/49 (51%), Positives = 30/49 (61%) Frame = -3 Query: 191 SAWASEVFLDQENIPCEWWALLVGWELRQLWSLCGAYIIFSILNMMLSF 45 S+ A E FL+ I WW+ L+ WE R LW L GA I+ SI N MLSF Sbjct: 23 SSDAIEEFLEHRPIALRWWSKLIVWESRLLWLLSGASIVVSIFNYMLSF 71 Score = 25.8 bits (55), Expect(2) = 3e-06 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -1 Query: 52 LVFVGHIGDSEFAGASM 2 L+F GH+G E AGAS+ Sbjct: 74 LMFTGHLGSLELAGASV 90