BLASTX nr result

ID: Coptis24_contig00021424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021424
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516716.1| multidrug resistance pump, putative [Ricinus...    55   3e-07
ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    52   3e-06

>ref|XP_002516716.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223544211|gb|EEF45735.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 313

 Score = 55.1 bits (131), Expect(2) = 3e-07
 Identities = 26/49 (53%), Positives = 30/49 (61%)
 Frame = -3

Query: 191 SAWASEVFLDQENIPCEWWALLVGWELRQLWSLCGAYIIFSILNMMLSF 45
           S+ A E FL+Q  +P  WW  LV WE R LW L  A I+ SI N MLSF
Sbjct: 23  SSSAIEEFLEQRTLPIRWWPRLVAWESRILWFLSAASIVASIFNFMLSF 71



 Score = 25.8 bits (55), Expect(2) = 3e-07
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 49  VFVGHIGDSEFAGASM 2
           +FVGH+G  E AGAS+
Sbjct: 75  MFVGHLGSVELAGASV 90


>ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max]
          Length = 505

 Score = 51.6 bits (122), Expect(2) = 3e-06
 Identities = 25/49 (51%), Positives = 30/49 (61%)
 Frame = -3

Query: 191 SAWASEVFLDQENIPCEWWALLVGWELRQLWSLCGAYIIFSILNMMLSF 45
           S+ A E FL+   I   WW+ L+ WE R LW L GA I+ SI N MLSF
Sbjct: 23  SSDAIEEFLEHRPIALRWWSKLIVWESRLLWLLSGASIVVSIFNYMLSF 71



 Score = 25.8 bits (55), Expect(2) = 3e-06
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 52  LVFVGHIGDSEFAGASM 2
           L+F GH+G  E AGAS+
Sbjct: 74  LMFTGHLGSLELAGASV 90


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