BLASTX nr result

ID: Coptis24_contig00021413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021413
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27125.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002279949.1| PREDICTED: uncharacterized protein LOC100256...   162   3e-38
ref|XP_004160832.1| PREDICTED: uncharacterized LOC101204847 [Cuc...   155   2e-36
ref|XP_004140887.1| PREDICTED: uncharacterized protein LOC101204...   155   2e-36
gb|ACN35808.1| unknown [Zea mays] gi|413953514|gb|AFW86163.1| me...   151   5e-35

>emb|CBI27125.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  162 bits (409), Expect = 3e-38
 Identities = 79/97 (81%), Positives = 89/97 (91%)
 Frame = -1

Query: 351 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNAVPSMNTIYTIFGTLLF 172
           VRAMGA+GYVLISSFLIRENILALIT+N+HAS+TY+ TAIGVN +PSM+ IY +FGTLL 
Sbjct: 96  VRAMGAMGYVLISSFLIRENILALITLNVHASITYMFTAIGVNTIPSMDLIYALFGTLLL 155

Query: 171 LNCGFFVFLLHILYAVILSRLGMKDSLTLPRWLKKAI 61
           LN GFFVFLLHILYAV LSRLGMK SLT+PRWL+KAI
Sbjct: 156 LNSGFFVFLLHILYAVFLSRLGMKASLTMPRWLEKAI 192


>ref|XP_002279949.1| PREDICTED: uncharacterized protein LOC100256033 isoform 1 [Vitis
           vinifera]
          Length = 286

 Score =  162 bits (409), Expect = 3e-38
 Identities = 79/97 (81%), Positives = 89/97 (91%)
 Frame = -1

Query: 351 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNAVPSMNTIYTIFGTLLF 172
           VRAMGA+GYVLISSFLIRENILALIT+N+HAS+TY+ TAIGVN +PSM+ IY +FGTLL 
Sbjct: 190 VRAMGAMGYVLISSFLIRENILALITLNVHASITYMFTAIGVNTIPSMDLIYALFGTLLL 249

Query: 171 LNCGFFVFLLHILYAVILSRLGMKDSLTLPRWLKKAI 61
           LN GFFVFLLHILYAV LSRLGMK SLT+PRWL+KAI
Sbjct: 250 LNSGFFVFLLHILYAVFLSRLGMKASLTMPRWLEKAI 286


>ref|XP_004160832.1| PREDICTED: uncharacterized LOC101204847 [Cucumis sativus]
          Length = 469

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/97 (77%), Positives = 87/97 (89%)
 Frame = -1

Query: 351 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNAVPSMNTIYTIFGTLLF 172
           VRA GAVGYVL+SSFLIRENILALITINIHASLT + TA GVN +PSMN IY IFGTL+F
Sbjct: 373 VRAFGAVGYVLVSSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLVF 432

Query: 171 LNCGFFVFLLHILYAVILSRLGMKDSLTLPRWLKKAI 61
           LNCG F+FLLH+LY++ L+RLG+K SLTLPRWL+KA+
Sbjct: 433 LNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 469


>ref|XP_004140887.1| PREDICTED: uncharacterized protein LOC101204847 [Cucumis sativus]
          Length = 301

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/97 (77%), Positives = 87/97 (89%)
 Frame = -1

Query: 351 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNAVPSMNTIYTIFGTLLF 172
           VRA GAVGYVL+SSFLIRENILALITINIHASLT + TA GVN +PSMN IY IFGTL+F
Sbjct: 205 VRAFGAVGYVLVSSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLVF 264

Query: 171 LNCGFFVFLLHILYAVILSRLGMKDSLTLPRWLKKAI 61
           LNCG F+FLLH+LY++ L+RLG+K SLTLPRWL+KA+
Sbjct: 265 LNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 301


>gb|ACN35808.1| unknown [Zea mays] gi|413953514|gb|AFW86163.1| membrane protein
           [Zea mays]
          Length = 278

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/97 (73%), Positives = 84/97 (86%)
 Frame = -1

Query: 351 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNAVPSMNTIYTIFGTLLF 172
           VRA+GA GYVL+SSFLIRENILALIT+NIHASLTY+LTA GVN +PSM TIY +FGTLL 
Sbjct: 182 VRALGACGYVLVSSFLIRENILALITVNIHASLTYILTAAGVNTIPSMGTIYLLFGTLLL 241

Query: 171 LNCGFFVFLLHILYAVILSRLGMKDSLTLPRWLKKAI 61
           LNCGFFVFLLH++Y V L++LG+K SL  PRWL + +
Sbjct: 242 LNCGFFVFLLHVMYTVFLAKLGIKPSLRSPRWLDRVM 278


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