BLASTX nr result

ID: Coptis24_contig00021409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021409
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin ...   156   2e-36
dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]         155   3e-36
ref|XP_002518243.1| leucine-rich repeat-containing protein, puta...   153   1e-35
ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing pr...   151   6e-35
emb|CBI17882.3| unnamed protein product [Vitis vinifera]              151   6e-35

>ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin homology
           domain-containing protein 1-like [Glycine max]
          Length = 360

 Score =  156 bits (394), Expect = 2e-36
 Identities = 80/114 (70%), Positives = 88/114 (77%)
 Frame = +2

Query: 2   NLENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCR 181
           NL NIPESL ARLLNMV+LD+HSNQL+SLPNSIGCLYKLK LN SGN +E LPKTIENCR
Sbjct: 69  NLLNIPESLTARLLNMVVLDVHSNQLRSLPNSIGCLYKLKVLNVSGNLIEYLPKTIENCR 128

Query: 182 SLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDA 343
           SLEELNANFNKL  LP+T+G+E               FLP S +HLT LRILDA
Sbjct: 129 SLEELNANFNKLIQLPDTIGYELKNLKKLSVNSNKLVFLPRSTSHLTALRILDA 182



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = +2

Query: 5   LENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCRS 184
           L  +P+++   L N+  L ++SN+L  LP S   L  L+ L+A  N L SLP+ +EN  +
Sbjct: 140 LIQLPDTIGYELKNLKKLSVNSNKLVFLPRSTSHLTALRILDARLNCLRSLPEDLENLIN 199

Query: 185 LEELNA--NFNKLKSLPETMGF 244
           LE LN   NF  L SLP ++GF
Sbjct: 200 LETLNVSQNFQYLDSLPYSVGF 221


>dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]
          Length = 350

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/114 (67%), Positives = 89/114 (78%)
 Frame = +2

Query: 2   NLENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCR 181
           NL+NIPESL ARLLNMV+LD+HSNQL+SLPNS+GCL KLK LN SGN +E LPK+IENCR
Sbjct: 65  NLQNIPESLTARLLNMVVLDVHSNQLRSLPNSVGCLSKLKVLNVSGNLIEYLPKSIENCR 124

Query: 182 SLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDA 343
           +LEELNANFNKL  LP+TMGFE               FLP S +HLT+L+ILDA
Sbjct: 125 ALEELNANFNKLSQLPDTMGFELLNLKKLSVNSNKLVFLPRSTSHLTSLKILDA 178



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = +2

Query: 5   LENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCRS 184
           L  +P+++   LLN+  L ++SN+L  LP S   L  LK L+A  N L SLP  +EN  +
Sbjct: 136 LSQLPDTMGFELLNLKKLSVNSNKLVFLPRSTSHLTSLKILDARLNCLRSLPDDLENLIN 195

Query: 185 LEELNA--NFNKLKSLPETMG 241
           LE LN   NF  L +LP ++G
Sbjct: 196 LETLNVSQNFQYLDTLPYSIG 216


>ref|XP_002518243.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542590|gb|EEF44129.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  153 bits (387), Expect = 1e-35
 Identities = 78/114 (68%), Positives = 88/114 (77%)
 Frame = +2

Query: 2   NLENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCR 181
           NL++IPESL ARLLN+VILD+HSNQLKSLPNSIGCL KLK LN +GN L  LPKTIENCR
Sbjct: 66  NLQSIPESLTARLLNIVILDVHSNQLKSLPNSIGCLSKLKVLNVAGNLLACLPKTIENCR 125

Query: 182 SLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDA 343
           SLEELNANFNKL  LP T+GFE               FLP+S+THLT+L+ LDA
Sbjct: 126 SLEELNANFNKLSVLPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKTLDA 179



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
 Frame = +2

Query: 5   LENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCRS 184
           L  +P ++   L+N+  L ++SN+L  LP+SI  L  LK L+A  N+L SLP+ +EN  +
Sbjct: 137 LSVLPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLIN 196

Query: 185 LEELNA--NFNKLKSLPETMG 241
           L+ LN   NF  L++LP ++G
Sbjct: 197 LKVLNVSQNFQYLETLPYSIG 217


>ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Vitis
           vinifera]
          Length = 351

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/114 (66%), Positives = 89/114 (78%)
 Frame = +2

Query: 2   NLENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCR 181
           NL+NIPESL ARLLN+VILD+HSNQLKSLPNSIGCL KLK LN SGN +++LPKTIENCR
Sbjct: 68  NLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCR 127

Query: 182 SLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDA 343
           SLEELNANFN+L  LP+T+GFE                LP S +HLT+L++LDA
Sbjct: 128 SLEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDA 181


>emb|CBI17882.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/114 (66%), Positives = 89/114 (78%)
 Frame = +2

Query: 2   NLENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLESLPKTIENCR 181
           NL+NIPESL ARLLN+VILD+HSNQLKSLPNSIGCL KLK LN SGN +++LPKTIENCR
Sbjct: 25  NLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCR 84

Query: 182 SLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXXFLPYSLTHLTNLRILDA 343
           SLEELNANFN+L  LP+T+GFE                LP S +HLT+L++LDA
Sbjct: 85  SLEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQVLDA 138


Top