BLASTX nr result

ID: Coptis24_contig00021406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021406
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514963.1| lipoxygenase, putative [Ricinus communis] gi...   235   2e-60
ref|XP_002314548.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59
ref|XP_002311724.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_003531186.1| PREDICTED: lipoxygenase 6, choloroplastic-li...   227   9e-58
ref|XP_002265505.1| PREDICTED: lipoxygenase 6, choloroplastic [V...   225   3e-57

>ref|XP_002514963.1| lipoxygenase, putative [Ricinus communis]
           gi|223546014|gb|EEF47517.1| lipoxygenase, putative
           [Ricinus communis]
          Length = 912

 Score =  235 bits (600), Expect = 2e-60
 Identities = 116/145 (80%), Positives = 127/145 (87%), Gaps = 2/145 (1%)
 Frame = +2

Query: 5   KINSLPGRISYVSRTVFFYNK-GVLHPITIELSVP-LPSLSINKRVYYTHGHVATKYWIW 178
           K+NSLPGR +Y SRTVF++NK G+L PI IELS+P  PS   NK+VY THGH AT +WIW
Sbjct: 492 KMNSLPGRKAYASRTVFYFNKAGMLRPIAIELSLPPKPSSPSNKKVY-THGHDATIHWIW 550

Query: 179 KLAKAHVCSNDAGVHQLGNHWLRTHACMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEIN 358
           KLAKAHVCSNDAGVHQL NHWLRTHA MEP+IIATHRQLS+MHPIYKLLHPHMRYTLEIN
Sbjct: 551 KLAKAHVCSNDAGVHQLVNHWLRTHAAMEPFIIATHRQLSAMHPIYKLLHPHMRYTLEIN 610

Query: 359 AVAHQILINGGGIIEECFSPGKYAM 433
           A+A Q LINGGGIIE CFSPGKYAM
Sbjct: 611 ALARQSLINGGGIIEACFSPGKYAM 635


>ref|XP_002314548.1| predicted protein [Populus trichocarpa] gi|222863588|gb|EEF00719.1|
           predicted protein [Populus trichocarpa]
          Length = 825

 Score =  231 bits (589), Expect = 5e-59
 Identities = 109/145 (75%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   KKINSLPGRISYVSRTVFFYNKG-VLHPITIELSVPLPSLSINKRVYYTHGHVATKYWIW 178
           +K+NSLPGR +Y SRTVFF+++  +L PI IELS+P    S  ++  YTHGH AT +WIW
Sbjct: 404 EKMNSLPGRKAYASRTVFFHDRANMLRPIAIELSLPQSPSSPGEKRVYTHGHDATTHWIW 463

Query: 179 KLAKAHVCSNDAGVHQLGNHWLRTHACMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEIN 358
           KLAKAHVCSNDAGVHQL NHWLRTHACME YIIATHRQLS+MHPIYKLLHPHMRYTLEIN
Sbjct: 464 KLAKAHVCSNDAGVHQLVNHWLRTHACMETYIIATHRQLSAMHPIYKLLHPHMRYTLEIN 523

Query: 359 AVAHQILINGGGIIEECFSPGKYAM 433
           A+A Q LINGGGIIE C+SPGKY+M
Sbjct: 524 AIARQSLINGGGIIETCYSPGKYSM 548


>ref|XP_002311724.1| predicted protein [Populus trichocarpa] gi|222851544|gb|EEE89091.1|
           predicted protein [Populus trichocarpa]
          Length = 924

 Score =  229 bits (583), Expect = 2e-58
 Identities = 113/146 (77%), Positives = 124/146 (84%), Gaps = 2/146 (1%)
 Frame = +2

Query: 2   KKINSLPGRISYVSRTVFFYNK-GVLHPITIELSVP-LPSLSINKRVYYTHGHVATKYWI 175
           +K+NSLPGR +Y SRTVFFY++ G+L PI IELS+P  PS   NK VY  HG  AT +WI
Sbjct: 503 EKMNSLPGRKAYASRTVFFYDQAGILRPIVIELSLPPSPSSPCNKHVYI-HGPDATTHWI 561

Query: 176 WKLAKAHVCSNDAGVHQLGNHWLRTHACMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEI 355
           WKLAKAHVCSNDAGVHQL NHWLRTHACME Y+IATHRQLS+MHPIYKLLHPH RYTLEI
Sbjct: 562 WKLAKAHVCSNDAGVHQLVNHWLRTHACMETYLIATHRQLSAMHPIYKLLHPHTRYTLEI 621

Query: 356 NAVAHQILINGGGIIEECFSPGKYAM 433
           NA+A Q LINGGGIIE CFSPGKYAM
Sbjct: 622 NALARQSLINGGGIIEACFSPGKYAM 647


>ref|XP_003531186.1| PREDICTED: lipoxygenase 6, choloroplastic-like [Glycine max]
          Length = 921

 Score =  227 bits (578), Expect = 9e-58
 Identities = 110/145 (75%), Positives = 119/145 (82%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   KKINSLPGRISYVSRTVFFYNK-GVLHPITIELSVPLPSLSINKRVYYTHGHVATKYWIW 178
           KK+NSLPGR +Y SRT+ F  K G+L PI IELS+P    S   +  YT GH AT +WIW
Sbjct: 500 KKMNSLPGRKAYASRTILFNTKTGILRPIAIELSLPQTHSSPQNKRIYTQGHDATTHWIW 559

Query: 179 KLAKAHVCSNDAGVHQLGNHWLRTHACMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEIN 358
           KLAKAHVCSNDAG+HQL NHWLRTHACMEPYIIAT RQLSSMHPIYKLLHPHMRYTLEIN
Sbjct: 560 KLAKAHVCSNDAGIHQLVNHWLRTHACMEPYIIATRRQLSSMHPIYKLLHPHMRYTLEIN 619

Query: 359 AVAHQILINGGGIIEECFSPGKYAM 433
           A+A Q LINGGGIIE  FSPGKYAM
Sbjct: 620 ALARQNLINGGGIIEASFSPGKYAM 644


>ref|XP_002265505.1| PREDICTED: lipoxygenase 6, choloroplastic [Vitis vinifera]
           gi|297738375|emb|CBI27576.3| unnamed protein product
           [Vitis vinifera]
          Length = 920

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/144 (75%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
 Frame = +2

Query: 5   KINSLPGRISYVSRTVFFYNK-GVLHPITIELSVPLPSLSINKRVYYTHGHVATKYWIWK 181
           K+N+LP R +Y SRTVFFY + G L PI IELS+P    S  K+  YTHGH AT +WIWK
Sbjct: 500 KMNTLPERQAYASRTVFFYTRTGFLRPIAIELSLPPTPSSPGKKRVYTHGHDATTHWIWK 559

Query: 182 LAKAHVCSNDAGVHQLGNHWLRTHACMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINA 361
            AKAHVCSNDAGVHQL NHWLRTHACMEPYIIATHRQLS+MHPI KLL PH+RYTLEINA
Sbjct: 560 QAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPINKLLRPHLRYTLEINA 619

Query: 362 VAHQILINGGGIIEECFSPGKYAM 433
           +A Q LINGGGIIE CFSPGKYAM
Sbjct: 620 LARQSLINGGGIIEACFSPGKYAM 643


Top