BLASTX nr result
ID: Coptis24_contig00021401
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021401
(469 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG00239.1|AC002130_4 F1N21.6 [Arabidopsis thaliana] 70 1e-24
gb|EEC69284.1| hypothetical protein OsI_38336 [Oryza sativa Indi... 75 4e-24
gb|EAZ43000.1| hypothetical protein OsJ_27587 [Oryza sativa Japo... 75 7e-24
gb|EEE51064.1| hypothetical protein OsJ_31731 [Oryza sativa Japo... 75 7e-24
gb|AAP54042.1| transposon protein, putative, Mutator sub-class [... 75 7e-24
>gb|AAG00239.1|AC002130_4 F1N21.6 [Arabidopsis thaliana]
Length = 901
Score = 70.1 bits (170), Expect(2) = 1e-24
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = -3
Query: 269 SRHVYANFRKRHSGAELKTLFWMACKCGTPQEFFLVMDQIKKISDEAYDYLHNEQNPKKW 90
+RH+YAN+RK +S ++ FW T ++ MD ++ +A+D L + +P+ W
Sbjct: 576 ARHIYANWRKVYSDYSHESYFWAIAYSSTNGDYRWNMDALRLYDPQAHDDLL-KTDPRTW 634
Query: 89 ARAFYSTNSYCEVVENNVCECFNGQIID 6
RAF+ST+S CE V NN+CE FN I D
Sbjct: 635 CRAFFSTHSRCEDVSNNLCESFNRTIRD 662
Score = 67.8 bits (164), Expect(2) = 1e-24
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = -1
Query: 469 MFPVAWAQVESENKDSWMWFLNLLLDDVGIIDGQG*TIISDQQKGLVEVISLMLPLAEHR 290
++P+AWA V E+ DSW WF+ L D+G+ G T+ISD++KGL+ V++ +LP AEHR
Sbjct: 514 IYPIAWAIVRVEDNDSWAWFVEHLKTDLGLGLGSLLTVISDKKKGLINVVADLLPQAEHR 573
Query: 289 CC 284
C
Sbjct: 574 HC 575
>gb|EEC69284.1| hypothetical protein OsI_38336 [Oryza sativa Indica Group]
Length = 911
Score = 75.5 bits (184), Expect(2) = 4e-24
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = -1
Query: 469 MFPVAWAQVESENKDSWMWFLNLLLDDVGIIDGQG*TIISDQQKGLVEVISLMLPLAEHR 290
M+P+AWA VE E DSW WF LL D+ DG G +ISDQQKG++ V+ +P AEHR
Sbjct: 670 MYPIAWAVVEKETNDSWDWFCALLFKDLVAGDGDGWVVISDQQKGIINVVETWIPKAEHR 729
Query: 289 CC 284
C
Sbjct: 730 NC 731
Score = 60.8 bits (146), Expect(2) = 4e-24
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = -3
Query: 269 SRHVYANFRKRHSGAELKTLFWMACKCGTPQEFFLVMDQIKKISDEAYDYLHNEQNPKKW 90
+RH+YAN+RK+ E + FW K F L ++ + + E + + + +P W
Sbjct: 732 ARHIYANWRKKFKNREWQKKFWRCAKAPCRPLFMLAKAKLAQCTREGAEAII-KTDPHHW 790
Query: 89 ARAFYSTNSYCEVVENNVCECFNGQIID 6
+RA++ S C+ V+NN+CE FN I++
Sbjct: 791 SRAWFKLGSNCDSVDNNMCESFNKWIVE 818
Score = 75.5 bits (184), Expect(2) = 1e-14
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = -1
Query: 469 MFPVAWAQVESENKDSWMWFLNLLLDDVGIIDGQG*TIISDQQKGLVEVISLMLPLAEHR 290
M+P+AWA VE E DSW WF LL D+ DG G +ISDQQKG++ V+ +P AEHR
Sbjct: 137 MYPIAWAVVEKETNDSWDWFCALLFKDLVAGDGDGWVVISDQQKGIINVVETWIPKAEHR 196
Query: 289 CC 284
C
Sbjct: 197 NC 198
Score = 28.9 bits (63), Expect(2) = 1e-14
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 269 SRHVYANFRKRHSGAELKTLFW 204
+RH+YAN+RK+ E + FW
Sbjct: 199 ARHIYANWRKKFKNREWQKKFW 220
>gb|EAZ43000.1| hypothetical protein OsJ_27587 [Oryza sativa Japonica Group]
Length = 950
Score = 75.5 bits (184), Expect(2) = 7e-24
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = -1
Query: 469 MFPVAWAQVESENKDSWMWFLNLLLDDVGIIDGQG*TIISDQQKGLVEVISLMLPLAEHR 290
M+P+AWA V EN + W WFL+LL D+ ++DG G ISDQQKG++ + P AEHR
Sbjct: 518 MYPIAWAVVHKENNEEWDWFLDLLCSDLKVLDGTGWVFISDQQKGIINAVEKWAPQAEHR 577
Query: 289 CC 284
C
Sbjct: 578 NC 579
Score = 60.1 bits (144), Expect(2) = 7e-24
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = -3
Query: 269 SRHVYANFRKRHSGAELKTLFWMACKCGTPQEFFLVMDQIKKISDEAYDYLHNEQNPKKW 90
+RH+YAN+++ S E + FW K F L ++ +++ + N +P+ W
Sbjct: 580 ARHIYANWKRHFSDKEFQKKFWRCAKAPCRMLFNLARAKLAQVTPAGAQAILNT-HPEHW 638
Query: 89 ARAFYSTNSYCEVVENNVCECFNGQIID 6
+RA++ S C+ V+NN+CE FN I++
Sbjct: 639 SRAWFKLGSNCDSVDNNMCESFNKWILE 666
>gb|EEE51064.1| hypothetical protein OsJ_31731 [Oryza sativa Japonica Group]
Length = 948
Score = 75.5 bits (184), Expect(2) = 7e-24
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = -1
Query: 469 MFPVAWAQVESENKDSWMWFLNLLLDDVGIIDGQG*TIISDQQKGLVEVISLMLPLAEHR 290
M+P+AWA V EN + W WFL+LL D+ ++DG G ISDQQKG++ + P AEHR
Sbjct: 518 MYPIAWAVVHKENNEEWDWFLDLLCSDLKVLDGTGWVFISDQQKGIINAVEKWAPQAEHR 577
Query: 289 CC 284
C
Sbjct: 578 NC 579
Score = 60.1 bits (144), Expect(2) = 7e-24
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = -3
Query: 269 SRHVYANFRKRHSGAELKTLFWMACKCGTPQEFFLVMDQIKKISDEAYDYLHNEQNPKKW 90
+RH+YAN+++ S E + FW K F L ++ +++ + N +P+ W
Sbjct: 580 ARHIYANWKRHFSDKEFQKKFWRCAKAPCRMLFNLARAKLAQVTPAGAQAILNT-HPEHW 638
Query: 89 ARAFYSTNSYCEVVENNVCECFNGQIID 6
+RA++ S C+ V+NN+CE FN I++
Sbjct: 639 SRAWFKLGSNCDSVDNNMCESFNKWILE 666
>gb|AAP54042.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 929
Score = 75.5 bits (184), Expect(2) = 7e-24
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = -1
Query: 469 MFPVAWAQVESENKDSWMWFLNLLLDDVGIIDGQG*TIISDQQKGLVEVISLMLPLAEHR 290
M+P+AWA V EN + W WFL+LL D+ ++DG G ISDQQKG++ + P AEHR
Sbjct: 518 MYPIAWAVVHKENNEEWDWFLDLLCSDLKVLDGTGWVFISDQQKGIINAVEKWAPQAEHR 577
Query: 289 CC 284
C
Sbjct: 578 NC 579
Score = 60.1 bits (144), Expect(2) = 7e-24
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = -3
Query: 269 SRHVYANFRKRHSGAELKTLFWMACKCGTPQEFFLVMDQIKKISDEAYDYLHNEQNPKKW 90
+RH+YAN+++ S E + FW K F L ++ +++ + N +P+ W
Sbjct: 580 ARHIYANWKRHFSDKEFQKKFWRCAKAPCRMLFNLARAKLAQVTPAGAQAILNT-HPEHW 638
Query: 89 ARAFYSTNSYCEVVENNVCECFNGQIID 6
+RA++ S C+ V+NN+CE FN I++
Sbjct: 639 SRAWFKLGSNCDSVDNNMCESFNKWILE 666