BLASTX nr result

ID: Coptis24_contig00021400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021400
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328075.1| predicted protein [Populus trichocarpa] gi|2...    94   6e-17
ref|XP_002313649.1| predicted protein [Populus trichocarpa] gi|2...    85   3e-14
ref|XP_002527462.1| conserved hypothetical protein [Ricinus comm...    74   9e-11
ref|XP_003606264.1| hypothetical protein MTR_4g055410 [Medicago ...    63   1e-07

>ref|XP_002328075.1| predicted protein [Populus trichocarpa] gi|222837590|gb|EEE75955.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 86/282 (30%), Positives = 118/282 (41%), Gaps = 30/282 (10%)
 Frame = +2

Query: 170 FISSYHSHGRSKAQMCLKKIIDFISSXXXXXXXXXXXXXXXXXSYGK-RGCGIDLNLRLG 346
           FI++   HG SK+QMCL+KI+  I+S                  + + RG  IDLN+ L 
Sbjct: 19  FINTTSRHGFSKSQMCLQKILRVITSCPPQEISKETSLNREILEFKENRGVDIDLNMGLS 78

Query: 347 PCLELLNNKG---------LSACSGVGEDDVEKVCDEIFXXXXXXXXXXXXXXIVDKSSE 499
           P     +N+          LSACS V +        E+F              +V     
Sbjct: 79  PAWSEADNQENQSSEESSLLSACSFVEKGIKNDSSMEVFAVDRSSSVGECCVKVVGDQVG 138

Query: 500 GEYDPQEEEERVVVLVDSQTGEIESSAITNNNPSEI--------------EIXXXXXXXX 637
            +    +        VD  T EI  +    N P+EI              +         
Sbjct: 139 YDSPTVQATGEESQGVDETTLEISKTTNLKNQPNEISSKIKAVNDDQEITKFKEEDTKKE 198

Query: 638 XXXXXXXXXXXXXXXXGYLDLLVEAARLISGNFENV--DEEMKVETKVGNDD--EKNWML 805
                             L LL+EAA + SGN E+   D E   ET  G+    + +W++
Sbjct: 199 SVKLEPCHEEKNESNKDSLALLIEAAEMFSGNLEDKESDSEKLEETTSGSKKSCKCSWVV 258

Query: 806 ECYDDFEDISPVVRSKRGRTQVLPYRYRDS--VLEPWKRLTK 925
           + Y+D    SPVVRSKRGR+QVLPYRYRDS  +LEPWKRL +
Sbjct: 259 DLYED-NTSSPVVRSKRGRSQVLPYRYRDSSVLLEPWKRLPR 299


>ref|XP_002313649.1| predicted protein [Populus trichocarpa] gi|222850057|gb|EEE87604.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 80/296 (27%), Positives = 123/296 (41%), Gaps = 28/296 (9%)
 Frame = +2

Query: 134 LSPPPQALNQVCF-ISSYHSHGRSKAQMCLKKIIDFISSXXXXXXXXXXXXXXXXXSYGK 310
           L+ P Q  +  CF I++   HG SK+Q CL+KI+  I+S                  + +
Sbjct: 7   LNHPNQVRDSSCFMINTTTRHGFSKSQTCLQKILHIITSYPPQEISKEASLNGEILGFEE 66

Query: 311 -RGCGIDLNLRLGPCLELLNNKG---------LSACSGVGEDDVEKVCDEIFXXXXXXXX 460
            RG GIDLN+ L P     N+           LSA S   +        E+F        
Sbjct: 67  NRGTGIDLNMGLSPAWSEANDHENQSPESSSLLSASSFAEKGLKNDSSTEVFTADKSSSE 126

Query: 461 XXXXXXIVDKSSEGEYDPQEEEERVVVLVDSQTGEIESSA----ITNNNPSEIEIXXXXX 628
                 +V      +    +       +VD  T +I  +     + N   S+IE+     
Sbjct: 127 GECCLKVVGDQFGRDSPTIQATGEESQVVDETTIDISKTTNFKHLANEIKSKIEVINDDQ 186

Query: 629 XXXXXXXXXXXXXXXXXXX-----------GYLDLLVEAARLISGNFENVDEEMKVETKV 775
                                           LDLL+EAA ++SGN E+ + +   + + 
Sbjct: 187 EMAKVKEEETKKVPVKVVEPCHGEKNETNKDCLDLLIEAAEMVSGNSEDKESDSDKQEET 246

Query: 776 GNDDEKNWMLECYDDFEDISPVVRSKRGRTQVLPYRYRDS--VLEPWKRLTKQRSS 937
               + + +++ Y+D    SPV+RSKR R+QVLP+RYRDS  +LEPWKRL K + +
Sbjct: 247 KRSRKCSLVVDLYED-NTSSPVIRSKRRRSQVLPHRYRDSSVLLEPWKRLPKPQKA 301


>ref|XP_002527462.1| conserved hypothetical protein [Ricinus communis]
           gi|223533197|gb|EEF34954.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 75/259 (28%), Positives = 103/259 (39%), Gaps = 6/259 (2%)
 Frame = +2

Query: 167 CFISSYHSHGRSKAQMCLKKIIDFISSXXXXXXXXXXXXXXXXXSYGKRGCGIDLNLRLG 346
           C  SS   HG SK+Q+CL+KI+  I+S                 +   R  GIDLN+ L 
Sbjct: 19  CSSSSNIRHGFSKSQLCLQKILQIIASYPPRHASAQSSSDHFDEN---RVLGIDLNMELC 75

Query: 347 PCLEL--LNNKGLSACSGVGEDDVEKVCDEIFXXXXXXXXXXXXXXIVDKSSEGEYDP-- 514
           P  E     ++ LSA S V +++                           SSEGE DP  
Sbjct: 76  PWPEADPQESESLSASSVVVDNNNNN------------NKVISSDSAEKSSSEGECDPVI 123

Query: 515 -QEEEERVVVLVDSQTGEIESSAITNNNPSEIEIXXXXXXXXXXXXXXXXXXXXXXXXGY 691
            Q  +E     ++ Q          N N  + +                           
Sbjct: 124 QQIRKESETTNLEIQEAAKHGHEQENENEKQQDFLDCDDGRANRVLSFQENRKSNDC--- 180

Query: 692 LDLLVEAARLISGNFENVDEEMKVETKVGNDDEKNWMLECYDDFEDISPVVRSKRGRTQV 871
           L LL++AA ++SGN ++++   +     G                 ISPV RSKRGR+ V
Sbjct: 181 LSLLIQAAEMVSGNLQDINPTSQAVRHGGA----------------ISPVARSKRGRSHV 224

Query: 872 LPYRYRDSV-LEPWKRLTK 925
           LP RYRDSV LEPWKRL +
Sbjct: 225 LPSRYRDSVFLEPWKRLPR 243


>ref|XP_003606264.1| hypothetical protein MTR_4g055410 [Medicago truncatula]
           gi|355507319|gb|AES88461.1| hypothetical protein
           MTR_4g055410 [Medicago truncatula]
          Length = 193

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 39/87 (44%), Positives = 55/87 (63%)
 Frame = +2

Query: 689 YLDLLVEAARLISGNFENVDEEMKVETKVGNDDEKNWMLECYDDFEDISPVVRSKRGRTQ 868
           YLDLL+EAAR++S   +N  +  + E + G +     +++ Y++     PVVRSKRGR Q
Sbjct: 101 YLDLLIEAARVLSE--KNGSDLEESEKRTGTELMARVVVDLYEN----EPVVRSKRGRNQ 154

Query: 869 VLPYRYRDSVLEPWKRLTKQRSSRVCS 949
            LP R+RDSV+EP KR  K R  R+ S
Sbjct: 155 ALPCRFRDSVIEPLKR--KDRKLRLSS 179


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