BLASTX nr result

ID: Coptis24_contig00021396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021396
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02100.1| unnamed protein product [Arabidopsis thaliana]        128   6e-28
ref|XP_003328374.1| hAT family dimerization domain-containing pr...   119   2e-25
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]   114   6e-24
emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]   114   6e-24
gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thali...   114   1e-23

>dbj|BAB02100.1| unnamed protein product [Arabidopsis thaliana]
          Length = 463

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/125 (48%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
 Frame = -2

Query: 380 LCLDGRLFHIRCSAHILNLIVQDGLNVIAPFIVKIRESARYGKNSQSRHEKFLNALAQTR 201
           L  DG+ FH+RC AH+LNLIVQ+GL++    +  IRES R+ K S+SR + F   +    
Sbjct: 289 LLCDGKFFHVRCCAHVLNLIVQEGLSIATELLENIRESVRFVKASESRKDAFAACVESVG 348

Query: 200 L-TGKGVSMDVPTRWNSTYDMLCSAIRVRRAFERLAELASDYKHLPSPEEWEMGTNICEC 24
           + +G G+S+DVPTRWNSTYDML  A++ R+AF  L E   +YK L S  EW+ G  IC+ 
Sbjct: 349 IRSGAGLSLDVPTRWNSTYDMLARALKFRKAFASLKECDRNYKSLTSENEWDRGERICDL 408

Query: 23  LKVFN 9
           LK F+
Sbjct: 409 LKPFS 413


>ref|XP_003328374.1| hAT family dimerization domain-containing protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
           gi|331245610|ref|XP_003335441.1| hAT family dimerization
           domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 701

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
 Frame = -2

Query: 374 LDGRLFHIRCSAHILNLIVQDGLNVIAPFIVKIRESARYGKNSQSRHEKFLNALAQTRLT 195
           LDG+ FH+RC+AHI+NLIV+DGL +I+  I KIRES RY K++ SR + F  A+  T+L 
Sbjct: 327 LDGKFFHVRCAAHIVNLIVKDGLKIISEGITKIRESVRYIKSTPSRKQAFNEAIKLTKLK 386

Query: 194 GKGV-SMDVPTRWNSTYDMLCSAIRVRRAFERLAELASDYKHLPSPEEWEMGTNICECLK 18
            + + S+DVPTRWNSTY ML SA+  + AFE L    +++   P+ E+WE    +C  L 
Sbjct: 387 KQALPSIDVPTRWNSTYLMLKSALPYKEAFENLTTEDANFTTCPTDEQWEEVATMCNFLC 446

Query: 17  VFN 9
           +FN
Sbjct: 447 IFN 449


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/124 (50%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = -2

Query: 380 LCLDGRLFHIRCSAHILNLIVQDGLNVIAPFIVKIRESARYGKNSQSRHEKFLNALAQTR 201
           L L+G++FH+RC+AH+LNLIV++GL+VI   I KIRES  Y   + SR EKF +A  Q R
Sbjct: 357 LLLNGKIFHMRCAAHVLNLIVKEGLDVIRVEIEKIRESVAYWSATPSRVEKFEDAARQLR 416

Query: 200 L-TGKGVSMDVPTRWNSTYDMLCSAIRVRRAFERLAELASDYKHLPSPEEWEMGTNICEC 24
           L   K + +D  TRWNSTY ML  AI  +  F RL +    Y  +PS EEW +   ICE 
Sbjct: 417 LPCNKKLCLDCKTRWNSTYLMLSIAITYKDVFPRLKQREKLYTTVPSEEEWNLAREICER 476

Query: 23  LKVF 12
           LK+F
Sbjct: 477 LKLF 480


>emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]
          Length = 1068

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/124 (50%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
 Frame = -2

Query: 380 LCLDGRLFHIRCSAHILNLIVQDGLNVIAPFIVKIRESARYGKNSQSRHEKFLNALAQTR 201
           L L+G++FH+RC+AH+LNLIV++GL+VI   I KIRES  Y   + SR EKF +A  Q R
Sbjct: 329 LLLNGKIFHMRCAAHVLNLIVKEGLDVIRVEIEKIRESVAYWSATPSRVEKFEDAARQLR 388

Query: 200 L-TGKGVSMDVPTRWNSTYDMLCSAIRVRRAFERLAELASDYKHLPSPEEWEMGTNICEC 24
           L   K + +D  TRWNSTY ML  AI  +  F RL +    Y  +PS EEW +   ICE 
Sbjct: 389 LPCNKKLCLDCKTRWNSTYLMLSIAITYKDVFPRLKQREKLYTTVPSEEEWNLAREICER 448

Query: 23  LKVF 12
           LK+F
Sbjct: 449 LKLF 452


>gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thaliana]
          Length = 577

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/124 (48%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
 Frame = -2

Query: 380 LCLDGRLFHIRCSAHILNLIVQDGLNVIAPFIVKIRESARYGKNSQSRHEKFLNALAQTR 201
           L   G  FH+RCSAHILNLIVQDGL VI+  + KIRE+ +Y K S++R   F N +    
Sbjct: 186 LVCSGEFFHVRCSAHILNLIVQDGLEVISGALEKIRETVKYVKGSETRENLFQNCMDTIG 245

Query: 200 L-TGKGVSMDVPTRWNSTYDMLCSAIRVRRAFERLAELASDYKHLPSPEEWEMGTNICEC 24
           + T   + +DV TRWNSTY ML  AI+ +     LAE+   YK  PS  EWE    IC+ 
Sbjct: 246 IQTEANLVLDVSTRWNSTYHMLSRAIQFKDVLRSLAEVDRGYKSFPSAVEWERAELICDL 305

Query: 23  LKVF 12
           LK F
Sbjct: 306 LKPF 309


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