BLASTX nr result

ID: Coptis24_contig00021389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021389
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor ...   103   1e-20
ref|XP_003544166.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   103   1e-20
gb|EEC70270.1| hypothetical protein OsI_01086 [Oryza sativa Indi...   103   2e-20
gb|EEE54204.1| hypothetical protein OsJ_01046 [Oryza sativa Japo...   103   2e-20
dbj|BAJ93824.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   2e-20

>ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Glycine max]
          Length = 452

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = -3

Query: 207 RSEPVSSFHWGNDTVTSVRFNPGQPNLLLTSSRDRSITLCDLRSSSSLGKLVMKTKTNSI 28
           RS+P++SF WG+DTV SVRFNPG+PNLL TS+ DRSI L DLR SS + K++M TKTNSI
Sbjct: 192 RSQPINSFEWGSDTVISVRFNPGEPNLLATSASDRSIILYDLRMSSPVRKMIMMTKTNSI 251

Query: 27  C*NPMEPMN 1
           C NPMEP+N
Sbjct: 252 CWNPMEPIN 260


>ref|XP_003544166.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
           13-like [Glycine max]
          Length = 452

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = -3

Query: 207 RSEPVSSFHWGNDTVTSVRFNPGQPNLLLTSSRDRSITLCDLRSSSSLGKLVMKTKTNSI 28
           RS+P++SF WG DTV SVRFNPG+PNLL TS+ DRSI L DLR SS + K++M TKTNSI
Sbjct: 192 RSQPINSFEWGTDTVISVRFNPGEPNLLATSASDRSIILYDLRMSSPVRKMIMMTKTNSI 251

Query: 27  C*NPMEPMN 1
           C NPMEP+N
Sbjct: 252 CWNPMEPIN 260


>gb|EEC70270.1| hypothetical protein OsI_01086 [Oryza sativa Indica Group]
          Length = 452

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = -3

Query: 207 RSEPVSSFHWGNDTVTSVRFNPGQPNLLLTSSRDRSITLCDLRSSSSLGKLVMKTKTNSI 28
           RSEP++SF WG DTV SVRFNPG+P++L+TS+ DRSITL DLR SS   KL+MKT+ NSI
Sbjct: 192 RSEPINSFEWGKDTVLSVRFNPGEPDVLITSASDRSITLYDLRMSSPARKLIMKTRCNSI 251

Query: 27  C*NPMEPMN 1
           C NP EPMN
Sbjct: 252 CWNPREPMN 260


>gb|EEE54204.1| hypothetical protein OsJ_01046 [Oryza sativa Japonica Group]
          Length = 452

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = -3

Query: 207 RSEPVSSFHWGNDTVTSVRFNPGQPNLLLTSSRDRSITLCDLRSSSSLGKLVMKTKTNSI 28
           RSEP++SF WG DTV SVRFNPG+P++L+TS+ DRSITL DLR SS   KL+MKT+ NSI
Sbjct: 192 RSEPINSFEWGKDTVLSVRFNPGEPDVLITSASDRSITLYDLRMSSPARKLIMKTRCNSI 251

Query: 27  C*NPMEPMN 1
           C NP EPMN
Sbjct: 252 CWNPREPMN 260


>dbj|BAJ93824.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 452

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = -3

Query: 207 RSEPVSSFHWGNDTVTSVRFNPGQPNLLLTSSRDRSITLCDLRSSSSLGKLVMKTKTNSI 28
           RSEP+++F WG DTV SVRFNPG+P++LLTSS DRS+TL DLR SS   KL+MKT+ NS+
Sbjct: 192 RSEPINTFEWGKDTVLSVRFNPGEPDVLLTSSSDRSLTLFDLRMSSPARKLIMKTRCNSV 251

Query: 27  C*NPMEPMN 1
           C NP EPMN
Sbjct: 252 CWNPREPMN 260


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