BLASTX nr result

ID: Coptis24_contig00021375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021375
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23079.3| unnamed protein product [Vitis vinifera]               57   1e-06

>emb|CBI23079.3| unnamed protein product [Vitis vinifera]
          Length = 86

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/76 (46%), Positives = 42/76 (55%)
 Frame = -3

Query: 271 SFGIIHRILEREWGKSGWTCHLNKWSFLQGVLIHLCKKIYARLWR*KNQRGNEERILYFI 92
           SF +IHR +EREW KSGW       SF    LI  C  +   L+  K  RG+EE   YF 
Sbjct: 2   SFAVIHRDVEREWEKSGW-------SFGSLFLIGSCCSLSEDLYICKILRGDEESKFYFK 54

Query: 91  LVIAMEHNGA*GIWSL 44
            +IA+EH GA   WSL
Sbjct: 55  FIIAVEHLGAYEQWSL 70


Top