BLASTX nr result

ID: Coptis24_contig00021369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021369
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   243   4e-62
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   241   8e-62
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   236   4e-60
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              236   4e-60
ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]         235   6e-60

>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  243 bits (619), Expect = 4e-62
 Identities = 133/240 (55%), Positives = 161/240 (67%)
 Frame = -3

Query: 721  ERIRSSHSHQLGASQLFTRFSLRDLLKWCKRIQXXXXXXXXXXXHERKIIYVEAVDIFAA 542
            ER+  S S          RFSLRDLLKWCKRI            ++  +IY EAVDIFA+
Sbjct: 530  ERVNPSPSGNSACLSCLNRFSLRDLLKWCKRIAELGLNGDMLTAYQCHLIYQEAVDIFAS 589

Query: 541  SSASCVNRLIIMKEIAKIWGVSALEIETLHPRHKPSVQELPSGFQIGRITLNWSRNVVHN 362
             SA   NRL +M++IAK+WGV   E   L+P  KP +Q L +  +IGR+TL  +  VVH 
Sbjct: 590  FSAPSENRLTVMRDIAKLWGVPISEAGILYPC-KPEIQNLFTELRIGRVTLQRTETVVHG 648

Query: 361  QTRPFVDIPSSLHILEKIACSVKHNEPVLLVGETGTGKTTLVQNLASRLGQPLTVLNLSQ 182
            Q R  V++ SSL++LE+IAC+VK+NEP+LLVGETGTGKTTLVQNLA  LGQ LTVLNLSQ
Sbjct: 649  QER-LVEMRSSLYVLEQIACAVKYNEPILLVGETGTGKTTLVQNLAMMLGQKLTVLNLSQ 707

Query: 181  QSDVEDLLGGLKSTDPRFICIPLYNEFMELFPRTFSKTVNPGILEYLRKRRNDKNWKKIL 2
            QSDV DLLGG K  D   ICIPLY EF  LF +TFS   N  I  YL+K+  +KNWK +L
Sbjct: 708  QSDVADLLGGFKPIDSLSICIPLYKEFEILFSKTFSMKENDKIFAYLQKQMKNKNWKTLL 767


>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  241 bits (616), Expect = 8e-62
 Identities = 136/251 (54%), Positives = 166/251 (66%), Gaps = 10/251 (3%)
 Frame = -3

Query: 724  YERIRSSHSHQLGASQ--------LFTRFSLRDLLKWCKRIQXXXXXXXXXXXHER--KI 575
            +ER+     +QLG  Q          +RFSLRDLLKWCKRI                 K 
Sbjct: 540  FERVNYVPLYQLGGFQSGNHPSFSCLSRFSLRDLLKWCKRIAALGFHFLGDGLSADACKC 599

Query: 574  IYVEAVDIFAASSASCVNRLIIMKEIAKIWGVSALEIETLHPRHKPSVQELPSGFQIGRI 395
            I++EAVDIFAA SAS  NRL IM+E+AK+W VS    E  +P +KP +Q+L +   IGR+
Sbjct: 600  IFLEAVDIFAAFSASAENRLTIMRELAKMWAVSDSVAEAFYPPNKPVIQDLGTDLTIGRV 659

Query: 394  TLNWSRNVVHNQTRPFVDIPSSLHILEKIACSVKHNEPVLLVGETGTGKTTLVQNLASRL 215
            TL+  + + H Q + FV+I SSLH+LE+IACSVK NEPVLLVGETGTGKTTLVQ LA RL
Sbjct: 660  TLHRHQRLRH-QKKLFVEIRSSLHLLERIACSVKCNEPVLLVGETGTGKTTLVQTLAMRL 718

Query: 214  GQPLTVLNLSQQSDVEDLLGGLKSTDPRFICIPLYNEFMELFPRTFSKTVNPGILEYLRK 35
            GQ LTVLNLSQQSDV DLLGG K  D +F+CIPLY +F  LF +TFS   N   L  L+ 
Sbjct: 719  GQKLTVLNLSQQSDVADLLGGFKPMDAQFVCIPLYKDFENLFSKTFSVKDNGEFLARLQH 778

Query: 34   RRNDKNWKKIL 2
              +DKNWK ++
Sbjct: 779  HLSDKNWKMLM 789


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
           [Medicago truncatula]
          Length = 5078

 Score =  236 bits (602), Expect = 4e-60
 Identities = 131/242 (54%), Positives = 158/242 (65%), Gaps = 1/242 (0%)
 Frame = -3

Query: 724 YERIRSSHSHQLGASQLFTRFSLRDLLKWCKRIQXXXXXXXXXXXHER-KIIYVEAVDIF 548
           ++R+ +S S    A     RFSLRDLLKWCKRI             E+   IY EAVD+F
Sbjct: 51  FDRVSNSISMFQVAGCSSVRFSLRDLLKWCKRITGLRFCFDGSLSEEQCNSIYTEAVDVF 110

Query: 547 AASSASCVNRLIIMKEIAKIWGVSALEIETLHPRHKPSVQELPSGFQIGRITLNWSRNVV 368
           A   AS  NRL IMKEI K+W       ETL+P  KP  Q+   G +IGR+ L +++   
Sbjct: 111 ATFPASFDNRLSIMKEIGKLWKRRDSAAETLYPLDKPIYQDSVPGLKIGRVLLQYTKTPS 170

Query: 367 HNQTRPFVDIPSSLHILEKIACSVKHNEPVLLVGETGTGKTTLVQNLASRLGQPLTVLNL 188
           + +  PFV+I SSL +LE+IACSVKHNEPVLLVGETGTGKTTLVQNLA RLGQ LTVLN+
Sbjct: 171 NERRIPFVEIRSSLFVLERIACSVKHNEPVLLVGETGTGKTTLVQNLALRLGQKLTVLNM 230

Query: 187 SQQSDVEDLLGGLKSTDPRFICIPLYNEFMELFPRTFSKTVNPGILEYLRKRRNDKNWKK 8
           SQQSDV DLLGG K  D +F+   LY EFM LF RTF   +N  +  +L K  N KNW+K
Sbjct: 231 SQQSDVADLLGGFKPVDEQFVYSHLYQEFMALFARTFPIELNSEVSNHLEKILNSKNWEK 290

Query: 7   IL 2
           +L
Sbjct: 291 LL 292



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/68 (45%), Positives = 40/68 (58%)
 Frame = -3

Query: 286  EPVLLVGETGTGKTTLVQNLASRLGQPLTVLNLSQQSDVEDLLGGLKSTDPRFICIPLYN 107
            EPVLLVGETG GKTT+ Q L++ L   L +LN  Q ++  D +GG +    RF  I  Y 
Sbjct: 888  EPVLLVGETGGGKTTVCQLLSACLQLKLHILNCHQYTETSDFIGGFRPIRDRFRLISNYE 947

Query: 106  EFMELFPR 83
            E +E   R
Sbjct: 948  EIIEQLKR 955


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  236 bits (602), Expect = 4e-60
 Identities = 126/222 (56%), Positives = 155/222 (69%), Gaps = 2/222 (0%)
 Frame = -3

Query: 661  SLRDLLKWCKRIQXXXXXXXXXXXHER--KIIYVEAVDIFAASSASCVNRLIIMKEIAKI 488
            ++RDLLKWCKRI                 K I++EAVDIFAA SAS  NRL IM+E+AK+
Sbjct: 504  NVRDLLKWCKRIAALGFHFLGDGLSADACKCIFLEAVDIFAAFSASAENRLTIMRELAKM 563

Query: 487  WGVSALEIETLHPRHKPSVQELPSGFQIGRITLNWSRNVVHNQTRPFVDIPSSLHILEKI 308
            W VS    E  +P +KP +Q+L +   IGR+TL+  + V+ +Q + FV+I SSLH+LE+I
Sbjct: 564  WAVSDSVAEAFYPPNKPVIQDLGTDLTIGRVTLHRHQRVLRHQKKLFVEIRSSLHLLERI 623

Query: 307  ACSVKHNEPVLLVGETGTGKTTLVQNLASRLGQPLTVLNLSQQSDVEDLLGGLKSTDPRF 128
            ACSVK NEPVLLVGETGTGKTTLVQ LA RLGQ LTVLNLSQQSDV DLLGG K  D +F
Sbjct: 624  ACSVKCNEPVLLVGETGTGKTTLVQTLAMRLGQKLTVLNLSQQSDVADLLGGFKPMDAQF 683

Query: 127  ICIPLYNEFMELFPRTFSKTVNPGILEYLRKRRNDKNWKKIL 2
            +CIPLY +F  LF +TFS   N   L  L+   +DKNWK ++
Sbjct: 684  VCIPLYKDFENLFSKTFSVKDNGEFLARLQHHLSDKNWKMLM 725


>ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]
          Length = 5062

 Score =  235 bits (600), Expect = 6e-60
 Identities = 126/224 (56%), Positives = 156/224 (69%), Gaps = 2/224 (0%)
 Frame = -3

Query: 667 RFSLRDLLKWCKRIQXXXXXXXXXXXH--ERKIIYVEAVDIFAASSASCVNRLIIMKEIA 494
           RFSLRDLLKWCKRI               + + IY EA+DIFAA S S  NRL IMKEIA
Sbjct: 168 RFSLRDLLKWCKRIVGLGFSFMGDGFSAYQCQSIYHEAIDIFAAFSTSPENRLTIMKEIA 227

Query: 493 KIWGVSALEIETLHPRHKPSVQELPSGFQIGRITLNWSRNVVHNQTRPFVDIPSSLHILE 314
           K+W   A    TL+P++KP++Q+L +  ++GR+ +   +    +  +PFV+I SSLH+LE
Sbjct: 228 KLWLGDASVPGTLYPQYKPAIQDLITELRVGRVDIQRVQPTSKHVVQPFVEIRSSLHMLE 287

Query: 313 KIACSVKHNEPVLLVGETGTGKTTLVQNLASRLGQPLTVLNLSQQSDVEDLLGGLKSTDP 134
           +IACS+K+NEPVLLVGETGTGKTTLVQ+LA R+G   TVLNLSQQSDV DLLGG K  D 
Sbjct: 288 RIACSIKYNEPVLLVGETGTGKTTLVQSLARRIGHNFTVLNLSQQSDVADLLGGFKPIDA 347

Query: 133 RFICIPLYNEFMELFPRTFSKTVNPGILEYLRKRRNDKNWKKIL 2
           RFIC  LY EF +LF +TFS  VN   L +L+K   DKNWK +L
Sbjct: 348 RFICFSLYKEFEDLFSKTFSLKVNVEFLAHLQKHFGDKNWKMLL 391


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