BLASTX nr result

ID: Coptis24_contig00021358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021358
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus c...    65   6e-09
ref|XP_004166402.1| PREDICTED: uncharacterized LOC101209453 [Cuc...    64   1e-08
ref|XP_004143953.1| PREDICTED: uncharacterized protein LOC101209...    64   1e-08
emb|CBI34537.3| unnamed protein product [Vitis vinifera]               58   1e-06

>ref|XP_002304329.1| predicted protein [Populus trichocarpa] gi|222841761|gb|EEE79308.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 47/98 (47%), Positives = 61/98 (62%)
 Frame = +1

Query: 226 YHDGFLRLSVGVSQRKQVTLLSKDGTVLSSKYLSFSEDVRTGSKLELTGHLVEIGEAILL 405
           YH G LRL+   S R QVTLLS+  T L+SK+LS SEDV+ GSKL L  +LVE+GE ++ 
Sbjct: 308 YHSGILRLASCGSYRMQVTLLSEGKTFLTSKFLSLSEDVKVGSKLALPKYLVEVGEPLMS 367

Query: 406 EGGDIQNANSLGTSLASCPTISTVDRMKLNSSDRRNKT 519
             G  Q  N+     A+  +IS  DR KL ++   NKT
Sbjct: 368 SEGKYQ--NTYLREDANSRSISIEDRTKLCNAVPTNKT 403


>ref|XP_002518858.1| hypothetical protein RCOM_1312210 [Ricinus communis]
           gi|223541845|gb|EEF43391.1| hypothetical protein
           RCOM_1312210 [Ricinus communis]
          Length = 520

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/56 (57%), Positives = 43/56 (76%)
 Frame = +1

Query: 226 YHDGFLRLSVGVSQRKQVTLLSKDGTVLSSKYLSFSEDVRTGSKLELTGHLVEIGE 393
           +H+G LRL+   S R QVTLL++D T+LSSK+L+ SEDVR+GS   L  +LVE+GE
Sbjct: 271 FHNGILRLTTSGSCRMQVTLLNEDKTILSSKFLNLSEDVRSGSTFVLPKYLVEVGE 326


>ref|XP_004166402.1| PREDICTED: uncharacterized LOC101209453 [Cucumis sativus]
          Length = 394

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/57 (54%), Positives = 43/57 (75%)
 Frame = +1

Query: 226 YHDGFLRLSVGVSQRKQVTLLSKDGTVLSSKYLSFSEDVRTGSKLELTGHLVEIGEA 396
           YH+G +++S   S + QVTLL++D  +LS K+LS S++VR G KLEL  +LVEIGEA
Sbjct: 290 YHNGIIKISSSGSHQMQVTLLNEDRNILSRKHLSLSKNVRVGEKLELPKYLVEIGEA 346


>ref|XP_004143953.1| PREDICTED: uncharacterized protein LOC101209453 [Cucumis sativus]
          Length = 369

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/57 (54%), Positives = 43/57 (75%)
 Frame = +1

Query: 226 YHDGFLRLSVGVSQRKQVTLLSKDGTVLSSKYLSFSEDVRTGSKLELTGHLVEIGEA 396
           YH+G +++S   S + QVTLL++D  +LS K+LS S++VR G KLEL  +LVEIGEA
Sbjct: 265 YHNGIIKISSSGSHQMQVTLLNEDRNILSRKHLSLSKNVRVGEKLELPKYLVEIGEA 321


>emb|CBI34537.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = +1

Query: 226 YHDGFLRLSVGVSQRKQVTLLSKDGTVLSSKYLSFSEDVRTGSKLELTGHLVEIGE 393
           YHDGFLRLS+G SQ +QV L      +L S++L   E +R+G  L    HLV++GE
Sbjct: 50  YHDGFLRLSIGGSQGRQVMLYDASKKLLDSRFLKKDEVIRSGESLTFDAHLVDVGE 105


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