BLASTX nr result

ID: Coptis24_contig00021357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021357
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM21191.1| ankyrin repeat family protein [Arabidopsis thaliana]    65   4e-09
ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002317571.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|NP_192255.2| ankyrin repeat-containing protein [Arabidopsis ...    62   4e-08

>gb|ADM21191.1| ankyrin repeat family protein [Arabidopsis thaliana]
          Length = 1161

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
 Frame = +2

Query: 44   LCQKNAKEDTPLHVAARAGHSELVNLLINYY------QRPLNGVALTLDSERGTHDTVNG 205
            L   N   +T LH+AA AGH++LV  ++N Y         +  VAL + +  G    V  
Sbjct: 704  LSSVNDHGNTMLHLAAAAGHTDLVCYILNAYPGLLMKSNSMGEVALHVAAGAGHLAVVEA 763

Query: 206  TGSSVETQRDIEGGEGLQPLWMMKNLEQNTALHLALKNRHADIAFRLLDLEHGLACFVNS 385
              S ++     + G   + ++  K+  Q+ ALH+ALK +H ++A  L+  E  L+   N+
Sbjct: 764  LVSFIKDISCNKPGVA-KKIYFAKDRHQDNALHVALKRKHVNVASCLVSAEQSLSFVANN 822

Query: 386  DGESPLFLAVE 418
            DG SPL+LAVE
Sbjct: 823  DGFSPLYLAVE 833



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 43/126 (34%), Positives = 63/126 (50%)
 Frame = +2

Query: 41  LLCQKNAKEDTPLHVAARAGHSELVNLLINYYQRPLNGVALTLDSERGTHDTVNGTGSSV 220
           LL Q N+K+  PLHVAAR GH  +V  L+           +T  S R             
Sbjct: 145 LLMQSNSKDQLPLHVAARMGHLAVVEDLV---------ALVTFFSAR-----------LA 184

Query: 221 ETQRDIEGGEGLQPLWMMKNLEQNTALHLALKNRHADIAFRLLDLEHGLACFVNSDGESP 400
           E  R+I     L P +++K++  +TAL+LALK  + ++A  L++     +     DG SP
Sbjct: 185 EEDREI-----LNP-YLLKDINGDTALNLALKGHYTEVALCLVNANRQASFLACKDGISP 238

Query: 401 LFLAVE 418
           L+LAVE
Sbjct: 239 LYLAVE 244


>ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|222860635|gb|EEE98182.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/126 (34%), Positives = 60/126 (47%)
 Frame = +2

Query: 35  RSLLCQKNAKEDTPLHVAARAGHSELVNLLINYYQRPLNGVALTLDSERGTHDTVNGTGS 214
           RSLL + N+  D+PLHVAAR GH  +V+ L+                        N +  
Sbjct: 59  RSLLTRPNSSGDSPLHVAARCGHFSIVDFLVKE----------------------NLSAK 96

Query: 215 SVETQRDIEGGEGLQPLWMMKNLEQNTALHLALKNRHADIAFRLLDLEHGLACFVNSDGE 394
            + T+    G  G   +    N E NT LH A++N +  +   LL ++  LACF N  GE
Sbjct: 97  RISTEN---GKTGKFDILRQGNNENNTVLHEAVRNGNMSVVKLLLRVDTKLACFENYAGE 153

Query: 395 SPLFLA 412
           SPLFLA
Sbjct: 154 SPLFLA 159


>ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|222860634|gb|EEE98181.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/126 (34%), Positives = 60/126 (47%)
 Frame = +2

Query: 35  RSLLCQKNAKEDTPLHVAARAGHSELVNLLINYYQRPLNGVALTLDSERGTHDTVNGTGS 214
           RSLL + N+  D+PLHVAAR GH  +V+ L+                        N +  
Sbjct: 59  RSLLTRPNSSGDSPLHVAARCGHFSIVDFLVKE----------------------NLSAK 96

Query: 215 SVETQRDIEGGEGLQPLWMMKNLEQNTALHLALKNRHADIAFRLLDLEHGLACFVNSDGE 394
            + T+    G  G   +    N E NT LH A++N +  +   LL ++  LACF N  GE
Sbjct: 97  RISTEN---GKTGKFDILRQGNNENNTVLHEAVRNGNMSVVKLLLRVDTKLACFENYAGE 153

Query: 395 SPLFLA 412
           SPLFLA
Sbjct: 154 SPLFLA 159


>ref|XP_002317571.1| predicted protein [Populus trichocarpa] gi|222860636|gb|EEE98183.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 46/126 (36%), Positives = 62/126 (49%)
 Frame = +2

Query: 35  RSLLCQKNAKEDTPLHVAARAGHSELVNLLINYYQRPLNGVALTLDSERGTHDTVNGTGS 214
           RSLL + N+  D+PLHVAAR GH  +V+ L+             L ++R +  T NG   
Sbjct: 59  RSLLTRPNSSGDSPLHVAARCGHFSIVDFLVKEI----------LSAKRIS--TENGKTG 106

Query: 215 SVETQRDIEGGEGLQPLWMMKNLEQNTALHLALKNRHADIAFRLLDLEHGLACFVNSDGE 394
             +  R               N E NT LH A++N +  +   LL ++  LACF N  GE
Sbjct: 107 KFDILRQ-------------GNKENNTVLHEAVRNGNMSVVKLLLRVDTKLACFENYAGE 153

Query: 395 SPLFLA 412
           SPLFLA
Sbjct: 154 SPLFLA 159


>ref|NP_192255.2| ankyrin repeat-containing protein [Arabidopsis thaliana]
           gi|332656924|gb|AEE82324.1| ankyrin repeat-containing
           protein [Arabidopsis thaliana]
          Length = 677

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
 Frame = +2

Query: 44  LCQKNAKEDTPLHVAARAGHSELVNLLINYY------QRPLNGVALTLDSERGTHDTVNG 205
           L   N   +T LH+AA AGH++LV  ++N Y         +  VAL + +  G    V  
Sbjct: 124 LSSVNDHGNTMLHLAAAAGHTDLVCYILNAYPGLLMKSNSMGEVALHVAAGAGHLAVVEA 183

Query: 206 TGSSVETQRDIEGGEGLQPLWMMKNLEQNTALHLALKNRHADIAFRLLDLEHGLACFVNS 385
             S ++     + G   + ++  K+  Q+ ALH++LK +H  +A  L+  E  L+   N+
Sbjct: 184 LVSFIKDISCNKPGVA-KKIYFAKDRHQDNALHVSLKRKHLKVASCLVCAEQSLSFVANN 242

Query: 386 DGESPLFLAVE 418
           DG SPL+LAVE
Sbjct: 243 DGVSPLYLAVE 253


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