BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021348
         (1294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   332   2e-88
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ...   318   2e-84
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   317   6e-84
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   317   6e-84
ref|XP_003525408.1| PREDICTED: general transcription factor IIE ...   315   1e-83

>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  332 bits (850), Expect = 2e-88
 Identities = 177/287 (61%), Positives = 215/287 (74%), Gaps = 2/287 (0%)
 Frame = +2

Query: 134 MVLEERLSKFHKQQQKCISTLTSIRARAGSSN-AAQHRIEASATISDSVPARFSHAIKFS 310
           M L+E L+KF KQQ+KC STLTSI A+AGSS      +   +A      PA     +KFS
Sbjct: 1   MALQESLAKFKKQQEKCQSTLTSIAAKAGSSKPTVPQKFTPAAPTKPPTPA-----VKFS 55

Query: 311 HDTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTN 490
           +DT RLQ INSIRK+PVG+QIKRVI LLL  R+AFTPE+INE C VD  ANK+VF+SL N
Sbjct: 56  NDTERLQHINSIRKAPVGAQIKRVIDLLLETRQAFTPEQINEACYVDTNANKAVFDSLRN 115

Query: 491 NIKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGE 670
           N KV+Y+G  F+YKS HD+KD+ QLL L++ FP+GI V++LKD+Y +V EDL+ALKA G+
Sbjct: 116 NPKVSYDGKRFAYKSKHDLKDRSQLLVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQ 175

Query: 671 VYLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNT 847
           V+LL N DSQ  I YP+DP+V I VDDDL   F+ IELPRDM+DIEKDLQKNGM+PATNT
Sbjct: 176 VWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQFFRTIELPRDMLDIEKDLQKNGMKPATNT 235

Query: 848 ARRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQILND 988
           A+RRA+ +VHGIAS            +SKRTKLTNAHLPELFQ L D
Sbjct: 236 AKRRAMAQVHGIAS--KSKPKKKKHEISKRTKLTNAHLPELFQNLKD 280


>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 280

 Score =  318 bits (815), Expect = 2e-84
 Identities = 167/285 (58%), Positives = 211/285 (74%), Gaps = 1/285 (0%)
 Frame = +2

Query: 134 MVLEERLSKFHKQQQKCISTLTSIRARAGSSNAAQHRIEASATISDSVPARFSHAIKFSH 313
           M L+ERL KF KQQ+KC +TL++I A   ++   +    ASA   ++ PA     +KFS+
Sbjct: 1   MALQERLDKFKKQQEKCQTTLSTIAATKAAAATQKSATHASANGRNAAPA-----VKFSN 55

Query: 314 DTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTNN 493
           DT RLQ INSIRK+PVG+Q+KRVI LLL  R+AFTPE+INE C VD+KANK VFE+L  N
Sbjct: 56  DTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMKANKDVFENLRKN 115

Query: 494 IKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGEV 673
            KV Y+G   SYKS + +KDK +LL L++ +P+G+ V++LKDAY TV EDL+A+KA G++
Sbjct: 116 PKVNYDGQRLSYKSKYGIKDKTELLQLVRKYPEGLAVIDLKDAYPTVMEDLQAMKAAGQI 175

Query: 674 YLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNTA 850
           +LL N DSQ  I YP+DPKV I VDDDL  LF+ IELPRDMIDIEKDLQKNGM+PATNTA
Sbjct: 176 WLLSNFDSQEDIAYPNDPKVHIKVDDDLKHLFRSIELPRDMIDIEKDLQKNGMKPATNTA 235

Query: 851 RRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQILN 985
           +RR+  ++ GI+S            +SKRTKLTNAHLPELFQ LN
Sbjct: 236 QRRSAAQIQGISS--KPKPKKKKSEISKRTKLTNAHLPELFQNLN 278


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  317 bits (811), Expect = 6e-84
 Identities = 172/285 (60%), Positives = 215/285 (75%), Gaps = 2/285 (0%)
 Frame = +2

Query: 134 MVLEERLSKFHKQQQKCISTLTSIRARAGSSNAA-QHRIEASATISDSVPARFSHAIKFS 310
           M L+E+L+KF +QQ+KC +TLTSI A+AGS   +   +I A + I   +P     A+KFS
Sbjct: 1   MDLQEQLNKFKRQQEKCQTTLTSIAAKAGSHKPSITPKIVAPSPI---IPRTPGPAVKFS 57

Query: 311 HDTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTN 490
           +DT RLQ I+SIRK+PVG+QIKRVI LL   R+AFTPE+INE C VDV +NK+VF+SL N
Sbjct: 58  NDTERLQHIHSIRKAPVGAQIKRVIDLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRN 117

Query: 491 NIKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGE 670
           N KV Y+G HFSYKS HD+KDK QLL LI+ F +GI V++LKDAY TV EDL+ALKA G 
Sbjct: 118 NPKVHYDGRHFSYKSKHDLKDKKQLLYLIREFKEGIAVIDLKDAYPTVMEDLQALKAAGG 177

Query: 671 VYLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNT 847
           ++LL N DSQ  I YP+DPK  I VDD+L + F+ IELPRDM+DIEKDLQKNGM+PATNT
Sbjct: 178 IWLLSNFDSQEDIAYPNDPKAVIKVDDELKVKFREIELPRDMLDIEKDLQKNGMKPATNT 237

Query: 848 ARRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQIL 982
           A+RRA  +V GI++          + +SK+TKLTNAHLPELFQ L
Sbjct: 238 AKRRAAAQVQGIST--KPKTKKKTKEISKKTKLTNAHLPELFQNL 280


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  317 bits (811), Expect = 6e-84
 Identities = 166/284 (58%), Positives = 211/284 (74%), Gaps = 1/284 (0%)
 Frame = +2

Query: 134 MVLEERLSKFHKQQQKCISTLTSIRARAGSSNAAQHRIEASATISDSVPARFSHAIKFSH 313
           M L+E+L +F KQQ+KC STLTSI     S ++   +  A A    +     + A+KFS+
Sbjct: 1   MALQEQLDRFKKQQEKCQSTLTSIAKSRPSKSSLTQKTVAVAPAPSTSARTPAPAVKFSN 60

Query: 314 DTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLTNN 493
           DT RLQ INSIRK+P G+QIKRVI LLL  R+AFTPE+IN+ C VD+ +NK+VF+SL NN
Sbjct: 61  DTERLQHINSIRKAPAGAQIKRVIDLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNN 120

Query: 494 IKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATGEV 673
            KV Y+G  FSYKS HD+KDK QLL LI+ FP+GI V++LKD+Y +V +DL+ALKA G++
Sbjct: 121 PKVHYDGKRFSYKSKHDLKDKSQLLVLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQI 180

Query: 674 YLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATNTA 850
           +LL N DSQ  I YP+DP++ I VDDDL  LF+GIELPRDM+DIEKDLQKNGM+PATNTA
Sbjct: 181 WLLSNFDSQEDIAYPNDPRMVIKVDDDLKQLFRGIELPRDMLDIEKDLQKNGMKPATNTA 240

Query: 851 RRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQIL 982
           +RRA  +V GI++            +SKRTKLTNAHLPELF+ L
Sbjct: 241 KRRAAAQVQGIST--KQKAKKKKHEISKRTKLTNAHLPELFKNL 282


>ref|XP_003525408.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 279

 Score =  315 bits (808), Expect = 1e-83
 Identities = 171/287 (59%), Positives = 212/287 (73%), Gaps = 3/287 (1%)
 Frame = +2

Query: 134 MVLEERLSKFHKQQQKCISTLTSIRAR--AGSSNAAQHRIEASATISDSVPARFSHAIKF 307
           M L+E+L KF KQQ+KC +TL+SI A   A +  +A H    SA   ++ PA     +KF
Sbjct: 1   MALQEKLDKFKKQQEKCQTTLSSIAASKAAATQKSAAH---GSANGRNAAPA-----VKF 52

Query: 308 SHDTARLQQINSIRKSPVGSQIKRVIALLLVERKAFTPEEINERCCVDVKANKSVFESLT 487
           S+DT RLQ INSIRK+PVG+Q+KRVI LLL  R+AFTPE+IN  C VD+KANK VFE+L 
Sbjct: 53  SNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINGACYVDMKANKDVFENLR 112

Query: 488 NNIKVTYEGGHFSYKSMHDVKDKDQLLSLIQVFPDGIPVVELKDAYSTVKEDLEALKATG 667
            N KV Y+G  FSYKS + +KDK +LL LI+ +P+G+ V++LKDAY TV EDL+ALKA G
Sbjct: 113 KNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAG 172

Query: 668 EVYLL-NLDSQSGIVYPDDPKVQIAVDDDLMLLFQGIELPRDMIDIEKDLQKNGMRPATN 844
           +++LL N DSQ  I YP+DPKV I VDDDL  LF+ IELPRDMIDIEKDLQKNGM+PATN
Sbjct: 173 QIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATN 232

Query: 845 TARRRAIGEVHGIASXXXXXXXXXXQGLSKRTKLTNAHLPELFQILN 985
           TA+RR+  ++ GI+S            +SKRTKLTNAHLPELFQ LN
Sbjct: 233 TAQRRSAAQIQGISS--KPKPKKKKSEISKRTKLTNAHLPELFQTLN 277