BLASTX nr result

ID: Coptis24_contig00021347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021347
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20094.3| unnamed protein product [Vitis vinifera]              255   3e-66
ref|XP_002285647.1| PREDICTED: peptide methionine sulfoxide redu...   255   3e-66
gb|AEA72443.1| chloroplast methionine sulfoxide reductase B1, pa...   253   9e-66
gb|ABO64857.1| methionine-R-sulfoxide reductase B4 protein [Caps...   249   1e-64
ref|NP_001148408.1| peptide methionine sulfoxide reductase msrB ...   248   3e-64

>emb|CBI20094.3| unnamed protein product [Vitis vinifera]
          Length = 149

 Score =  255 bits (651), Expect = 3e-66
 Identities = 115/132 (87%), Positives = 123/132 (93%)
 Frame = +2

Query: 2   GKSDYASLSNEEWKKRLTSEQFYVTRQKGTERAFTGEYCDTKTPGTYLCICCDTPLFESS 181
           GK DY S+S+EEWKKRLT EQFY+TRQKGTERAFTGEY +TKTPG Y CICCDTPLFESS
Sbjct: 18  GKVDYTSISDEEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGAYHCICCDTPLFESS 77

Query: 182 TKFDSGTGWPSYYEPIGNNVKTKLDMSIIFMPRQEVVCAVCDAHLGHVFDDGPRPTGKRY 361
           TKFDSGTGWPSYY+PIGNNVK+KLD+SIIFMPRQEV+CA CDAHLGHVFDDGP PTGKRY
Sbjct: 78  TKFDSGTGWPSYYQPIGNNVKSKLDLSIIFMPRQEVLCAACDAHLGHVFDDGPPPTGKRY 137

Query: 362 CINSVSLKLKPK 397
           CINS SLKLKPK
Sbjct: 138 CINSASLKLKPK 149


>ref|XP_002285647.1| PREDICTED: peptide methionine sulfoxide reductase B1,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 198

 Score =  255 bits (651), Expect = 3e-66
 Identities = 115/132 (87%), Positives = 123/132 (93%)
 Frame = +2

Query: 2   GKSDYASLSNEEWKKRLTSEQFYVTRQKGTERAFTGEYCDTKTPGTYLCICCDTPLFESS 181
           GK DY S+S+EEWKKRLT EQFY+TRQKGTERAFTGEY +TKTPG Y CICCDTPLFESS
Sbjct: 67  GKVDYTSISDEEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGAYHCICCDTPLFESS 126

Query: 182 TKFDSGTGWPSYYEPIGNNVKTKLDMSIIFMPRQEVVCAVCDAHLGHVFDDGPRPTGKRY 361
           TKFDSGTGWPSYY+PIGNNVK+KLD+SIIFMPRQEV+CA CDAHLGHVFDDGP PTGKRY
Sbjct: 127 TKFDSGTGWPSYYQPIGNNVKSKLDLSIIFMPRQEVLCAACDAHLGHVFDDGPPPTGKRY 186

Query: 362 CINSVSLKLKPK 397
           CINS SLKLKPK
Sbjct: 187 CINSASLKLKPK 198


>gb|AEA72443.1| chloroplast methionine sulfoxide reductase B1, partial [Carica
           papaya]
          Length = 199

 Score =  253 bits (647), Expect = 9e-66
 Identities = 113/132 (85%), Positives = 125/132 (94%)
 Frame = +2

Query: 2   GKSDYASLSNEEWKKRLTSEQFYVTRQKGTERAFTGEYCDTKTPGTYLCICCDTPLFESS 181
           GK DYAS +++EWKKRLT EQFY+TRQKGTERAFTGEY +TKTPGTY CICCDTPLFESS
Sbjct: 67  GKIDYASWTDDEWKKRLTGEQFYITRQKGTERAFTGEYWNTKTPGTYHCICCDTPLFESS 126

Query: 182 TKFDSGTGWPSYYEPIGNNVKTKLDMSIIFMPRQEVVCAVCDAHLGHVFDDGPRPTGKRY 361
           TKFDSGTGWPSYYEP+GNNVK+KLD+SIIFMPRQEV+C+VCDAHLGHVFDDGP PTGKRY
Sbjct: 127 TKFDSGTGWPSYYEPVGNNVKSKLDLSIIFMPRQEVLCSVCDAHLGHVFDDGPPPTGKRY 186

Query: 362 CINSVSLKLKPK 397
           CINS +L+LKPK
Sbjct: 187 CINSAALRLKPK 198


>gb|ABO64857.1| methionine-R-sulfoxide reductase B4 protein [Capsicum annuum]
          Length = 148

 Score =  249 bits (637), Expect = 1e-64
 Identities = 111/129 (86%), Positives = 124/129 (96%)
 Frame = +2

Query: 11  DYASLSNEEWKKRLTSEQFYVTRQKGTERAFTGEYCDTKTPGTYLCICCDTPLFESSTKF 190
           DY+S+S+EEWKK+LT+EQFY+TRQKGTERAFTGEY +TKTPGTY CICCDTPLFESSTKF
Sbjct: 20  DYSSISDEEWKKQLTNEQFYITRQKGTERAFTGEYWNTKTPGTYHCICCDTPLFESSTKF 79

Query: 191 DSGTGWPSYYEPIGNNVKTKLDMSIIFMPRQEVVCAVCDAHLGHVFDDGPRPTGKRYCIN 370
           DSGTGWPSYY+PIGNNVK+K+D+SIIFMPRQEV+CA CDAHLGHVFDDGP PTGKRYCIN
Sbjct: 80  DSGTGWPSYYQPIGNNVKSKMDLSIIFMPRQEVLCAGCDAHLGHVFDDGPPPTGKRYCIN 139

Query: 371 SVSLKLKPK 397
           S +LKLKPK
Sbjct: 140 SAALKLKPK 148


>ref|NP_001148408.1| peptide methionine sulfoxide reductase msrB [Zea mays]
           gi|195619072|gb|ACG31366.1| peptide methionine sulfoxide
           reductase msrB [Zea mays] gi|413944213|gb|AFW76862.1|
           peptide methionine sulfoxide reductase msrB [Zea mays]
          Length = 209

 Score =  248 bits (634), Expect = 3e-64
 Identities = 112/132 (84%), Positives = 121/132 (91%)
 Frame = +2

Query: 2   GKSDYASLSNEEWKKRLTSEQFYVTRQKGTERAFTGEYCDTKTPGTYLCICCDTPLFESS 181
           GK+DY SLS EEWKKRLT EQ+YVTRQKGTERAFTGEY +TKTPG Y C+CCDTPLF+SS
Sbjct: 78  GKADYKSLSEEEWKKRLTEEQYYVTRQKGTERAFTGEYWNTKTPGIYQCVCCDTPLFQSS 137

Query: 182 TKFDSGTGWPSYYEPIGNNVKTKLDMSIIFMPRQEVVCAVCDAHLGHVFDDGPRPTGKRY 361
           TKFDSGTGWPSYY+PIG NVK+KLDMSIIFMPR EV+CA CDAHLGHVFDDGP PTGKRY
Sbjct: 138 TKFDSGTGWPSYYKPIGENVKSKLDMSIIFMPRTEVLCATCDAHLGHVFDDGPPPTGKRY 197

Query: 362 CINSVSLKLKPK 397
           CINS SLKLKP+
Sbjct: 198 CINSASLKLKPQ 209


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