BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021346
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]     72   5e-11
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    69   3e-10
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    69   5e-10

>dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 384

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = +3

Query: 69  DRLSSLPEPLVHHILSFLDMSDVMETPFLSKRWRYVWVSLPFLNFDEYKWLDKKRKRANW 248
           DRLSSLP+ L+HH++SFL M +V+ T  LS RWR+VW S PF+  D  +++DK  K  N+
Sbjct: 22  DRLSSLPDDLLHHVMSFLPMPEVVRTSLLSPRWRFVWRSTPFIRIDGAEFMDKS-KLENF 80

Query: 249 ENCSVL 266
            +C +L
Sbjct: 81  VDCLLL 86


>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
 Frame = +3

Query: 30  SKKLEPSGINLDEDRLSSLPEPLVHHILSFLDMSDVMETPFLSKRWRYVWVSLPFL--NF 203
           S+  + S +N +EDR+S+LP  L+HHILSFLD   V++T  LSKRW  VW S P+L  NF
Sbjct: 3   SRTRKRSSLNNNEDRISTLPNVLLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDFNF 62

Query: 204 DEYKWLDKKRKRANWENCSVLGFINNVLLFRNNSDIKRLTVN 329
           + +  L       +  N +   FI++VL+ RNN    +L+++
Sbjct: 63  ETFSSLISSYYYDDDMN-NFTDFISHVLVRRNNVKAFKLSLD 103


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = +3

Query: 6   EKSMAET-SSKKLEPSGINLDEDRLSSLPEPLVHHILSFLDMSDVMETPFLSKRWRYVWV 182
           +KS  E  +S+ ++   +   EDRLS +P+ ++HHILSF++  D ++T  LSKRWRY+W 
Sbjct: 34  KKSKTEILASQNVDNCEMEESEDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWA 93

Query: 183 SLPFLNFDEYKWLDKKRKRANWENCSVLGFINNVLLFRNNSDIKRLTVNVPFEYG 347
           S+P LNF    ++             ++ F   VL   N+ D   + + V + +G
Sbjct: 94  SVPCLNFSSKSFM------------RLVDFKKFVLWVLNHRDSSHVKLLVYYRFG 136


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
 Frame = +3

Query: 30  SKKLEPSGINLDEDRLSSLPEPLVHHILSFLDMSDVMETPFLSKRWRYVWVSLPFL--NF 203
           S+  + S +N +EDR+S+LP  L+H ILSF+D   V++T  LSKRW  VW S P+L  NF
Sbjct: 3   SRTRKRSSLNNNEDRISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNF 62

Query: 204 DEYKWLDKKRKRANWENCSVLGFINNVLLFRNNSDIKRLTVNV-----------PFEYGA 350
           + +  L       + E  +   FIN VL+ RNN    ++++++              Y  
Sbjct: 63  ETFSSLINSDYYED-EMVNFTDFINQVLVRRNNFKAIKISLDLCGHTRYSLVESLIYYAV 121

Query: 351 RHFCE--CITSVARKNP 395
           +H  E  CI +  R  P
Sbjct: 122 KHHAEEICIDTACRDVP 138


>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59200
           gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
           thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
           [Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
           At3g59200 [Arabidopsis thaliana]
           gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 520

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
 Frame = +3

Query: 60  LDEDRLSSLPEPLVHHILSFLDMSDVMETPFLSKRWRYVWVSLPFLNFDEYKWLDKKRKR 239
           +  DR+SSLP P+V HILSFL   +   T  LSK+WRY++  +  L+FD+  + D K K 
Sbjct: 4   VSRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKS 63

Query: 240 ANWENCSVLGFINNVLLFRNNSDIKRLTVNVP-FEYGARHFCECITSVARKNPQEVDMEV 416
               + S + F++ VL  + N  + + ++    ++         I +V  +   E+D+ +
Sbjct: 64  DVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSI 123

Query: 417 L 419
           L
Sbjct: 124 L 124