BLASTX nr result

ID: Coptis24_contig00021345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021345
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799...    69   4e-10
ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806...    67   2e-09
ref|XP_002514605.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247...    64   1e-08

>ref|XP_002305296.1| predicted protein [Populus trichocarpa] gi|222848260|gb|EEE85807.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 45/103 (43%), Positives = 63/103 (61%), Gaps = 8/103 (7%)
 Frame = +3

Query: 6   MLEKQNFLDLEEHDEEGNFITDPISWLSED--------HTXXXXXXXXXXXXXFDRVIYK 161
           M E Q F+DL+++    NF  DP SWLSED        H               DRV++ 
Sbjct: 1   MYEAQRFVDLQQNSS--NF-GDPKSWLSEDSNSNSSPTHHPNHSQLASSAGGNVDRVLFN 57

Query: 162 NLVEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTKDSFSKK 290
           +LVEMVPL+++L+DRK   S+SFTRR +++ TKTP+++S SKK
Sbjct: 58  DLVEMVPLVQSLIDRKV--STSFTRRGSVIYTKTPSRESLSKK 98


>ref|XP_003524494.1| PREDICTED: uncharacterized protein LOC100799930 [Glycine max]
          Length = 327

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/91 (43%), Positives = 58/91 (63%)
 Frame = +3

Query: 18  QNFLDLEEHDEEGNFITDPISWLSEDHTXXXXXXXXXXXXXFDRVIYKNLVEMVPLIETL 197
           Q+F+DL+E+ E G    +  SWLS                  DRV++ +LVE+VPL+++L
Sbjct: 2   QHFVDLQENSELG----ESNSWLSAKEQSGAAPNTN-----LDRVLFNDLVEIVPLVQSL 52

Query: 198 MDRKANNSSSFTRRATMVCTKTPTKDSFSKK 290
           +DRKA  S SFTRR +M+ TKTPT++S SK+
Sbjct: 53  IDRKA--SRSFTRRGSMIYTKTPTRESLSKR 81


>ref|XP_003549581.1| PREDICTED: uncharacterized protein LOC100806411 [Glycine max]
          Length = 327

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/91 (42%), Positives = 57/91 (62%)
 Frame = +3

Query: 18  QNFLDLEEHDEEGNFITDPISWLSEDHTXXXXXXXXXXXXXFDRVIYKNLVEMVPLIETL 197
           Q+F+DL+ + E G    +  SWLS                  DRV++ +LVE+VPL+++L
Sbjct: 2   QHFMDLQANSELG----ESNSWLSVKEQSGAAPNTN-----LDRVLFNDLVEIVPLVQSL 52

Query: 198 MDRKANNSSSFTRRATMVCTKTPTKDSFSKK 290
           +DRKA  S SFTRR +M+ TKTPT++S SK+
Sbjct: 53  IDRKA--SRSFTRRGSMIYTKTPTRESLSKR 81


>ref|XP_002514605.1| conserved hypothetical protein [Ricinus communis]
           gi|223546209|gb|EEF47711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 367

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
 Frame = +3

Query: 18  QNFLDLEEHDEEGNFITDPISWLSEDH------------TXXXXXXXXXXXXXFDRVIYK 161
           Q+F+DL+E+   G    D  SWL +D             T              D V++ 
Sbjct: 6   QHFVDLQENSSFG----DTKSWLLDDDDKNNNSSPTLRLTHSNSASTAGTTGNIDPVLFN 61

Query: 162 NLVEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTKDSFSKK 290
           N+VEMVPLIE+L+ RK N  SSFTRR +M+ TKTP++DS  KK
Sbjct: 62  NIVEMVPLIESLIHRKGN--SSFTRRGSMIYTKTPSRDSLYKK 102


>ref|XP_002273093.1| PREDICTED: uncharacterized protein LOC100247402 [Vitis vinifera]
           gi|297734104|emb|CBI15351.3| unnamed protein product
           [Vitis vinifera]
          Length = 368

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
 Frame = +3

Query: 6   MLEKQNFLDLEEHDEEGNFITDPISWLSED----------HTXXXXXXXXXXXXXFDRVI 155
           M E Q+F+DL ++   G    DP SWLS D           +              DR++
Sbjct: 1   MFEPQHFMDLHDNSSLG----DPKSWLSGDDNSSPIHRRTQSSLSSASAAGTAANVDRLL 56

Query: 156 YKNLVEMVPLIETLMDRKANNSSSFTRRATMVCTKTPTKDSFSKK 290
           + +LVE+VPL+++L+DRKA  SSSFTR   +  TKTP+++S S++
Sbjct: 57  FNDLVEIVPLVQSLIDRKA--SSSFTRVGAVTYTKTPSRESLSRR 99


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