BLASTX nr result

ID: Coptis24_contig00021329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021329
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15253.3| unnamed protein product [Vitis vinifera]              493   e-137
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...   493   e-137
ref|XP_002511544.1| abc transporter, putative [Ricinus communis]...   453   e-125
ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7...   434   e-119
ref|NP_190363.3| ABC transporter A family member 8 [Arabidopsis ...   432   e-119

>emb|CBI15253.3| unnamed protein product [Vitis vinifera]
          Length = 928

 Score =  493 bits (1270), Expect = e-137
 Identities = 229/328 (69%), Positives = 280/328 (85%)
 Frame = +1

Query: 1    ELTNFIEPALLSSHPMYNVQPECTPNSTFYVPITIGSTTFRQEVRCVQGINVWRSSSLVL 180
            E TNF++PA  S  P+Y+V+P+C PNSTF V  ++ ST  +QE++CVQG+++WR+SS  +
Sbjct: 165  ETTNFLDPAFFSDLPIYHVEPQCAPNSTFSVSFSLASTNVQQEIQCVQGLHLWRNSSSEI 224

Query: 181  NEELYDGYRQANPDTKKINEFIAAYDFINTNEKNFNVSIWYNSTYQNATANSALGLLRVP 360
            N+EL+ GY + N + +KINE +AAYDF+N+N  NFNVSIWYNSTY+N    S++ L+RVP
Sbjct: 225  NDELFKGYHKGNSE-RKINEIVAAYDFLNSNGNNFNVSIWYNSTYKNDAGASSIALVRVP 283

Query: 361  RSLNMLSNAYLQFFRGSAVKVLLEFVKEMPKPGTKVTLDFSSILGALFFTWVVLQLFPVI 540
            RS+N+ SNAYLQ  +G  VK++L+F+KEMPKP T+V LD SS+LG LFFTWV+LQLFPV+
Sbjct: 284  RSVNLASNAYLQLVQGDGVKMVLDFIKEMPKPETQVRLDLSSVLGTLFFTWVILQLFPVV 343

Query: 541  LTSLVYEKQRNLRIMMKMHGLGDGPYWMISYAYFLVLSLVYMTCFVVFGSLIGLKFFTLN 720
            LTSLVYEKQ+NLRIMMKMHGLGDGPYWMISYAYFLV+S +YM CFV+FGS+IGLKFFTLN
Sbjct: 344  LTSLVYEKQQNLRIMMKMHGLGDGPYWMISYAYFLVISSIYMLCFVIFGSVIGLKFFTLN 403

Query: 721  SYSIQIVFYFIYINLQIALAFLLATMFSNVKTATVVGQICVFSSGLLGAFLLQPFVQDTS 900
             YSIQ+VFYFIYINLQI+LAFLLA  FSNVKTATV+G ICVF +GLLG FL Q F+QDTS
Sbjct: 404  DYSIQLVFYFIYINLQISLAFLLAAAFSNVKTATVLGYICVFGTGLLGGFLFQFFIQDTS 463

Query: 901  FPRGWTVVMELFPGFSLYRGLYEFAQYS 984
            FP GW +VMEL+PGFSLYRGLYEFAQYS
Sbjct: 464  FPNGWIIVMELYPGFSLYRGLYEFAQYS 491


>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score =  493 bits (1270), Expect = e-137
 Identities = 229/328 (69%), Positives = 280/328 (85%)
 Frame = +1

Query: 1    ELTNFIEPALLSSHPMYNVQPECTPNSTFYVPITIGSTTFRQEVRCVQGINVWRSSSLVL 180
            E TNF++PA  S  P+Y+V+P+C PNSTF V  ++ ST  +QE++CVQG+++WR+SS  +
Sbjct: 186  ETTNFLDPAFFSDLPIYHVEPQCAPNSTFSVSFSLASTNVQQEIQCVQGLHLWRNSSSEI 245

Query: 181  NEELYDGYRQANPDTKKINEFIAAYDFINTNEKNFNVSIWYNSTYQNATANSALGLLRVP 360
            N+EL+ GY + N + +KINE +AAYDF+N+N  NFNVSIWYNSTY+N    S++ L+RVP
Sbjct: 246  NDELFKGYHKGNSE-RKINEIVAAYDFLNSNGNNFNVSIWYNSTYKNDAGASSIALVRVP 304

Query: 361  RSLNMLSNAYLQFFRGSAVKVLLEFVKEMPKPGTKVTLDFSSILGALFFTWVVLQLFPVI 540
            RS+N+ SNAYLQ  +G  VK++L+F+KEMPKP T+V LD SS+LG LFFTWV+LQLFPV+
Sbjct: 305  RSVNLASNAYLQLVQGDGVKMVLDFIKEMPKPETQVRLDLSSVLGTLFFTWVILQLFPVV 364

Query: 541  LTSLVYEKQRNLRIMMKMHGLGDGPYWMISYAYFLVLSLVYMTCFVVFGSLIGLKFFTLN 720
            LTSLVYEKQ+NLRIMMKMHGLGDGPYWMISYAYFLV+S +YM CFV+FGS+IGLKFFTLN
Sbjct: 365  LTSLVYEKQQNLRIMMKMHGLGDGPYWMISYAYFLVISSIYMLCFVIFGSVIGLKFFTLN 424

Query: 721  SYSIQIVFYFIYINLQIALAFLLATMFSNVKTATVVGQICVFSSGLLGAFLLQPFVQDTS 900
             YSIQ+VFYFIYINLQI+LAFLLA  FSNVKTATV+G ICVF +GLLG FL Q F+QDTS
Sbjct: 425  DYSIQLVFYFIYINLQISLAFLLAAAFSNVKTATVLGYICVFGTGLLGGFLFQFFIQDTS 484

Query: 901  FPRGWTVVMELFPGFSLYRGLYEFAQYS 984
            FP GW +VMEL+PGFSLYRGLYEFAQYS
Sbjct: 485  FPNGWIIVMELYPGFSLYRGLYEFAQYS 512


>ref|XP_002511544.1| abc transporter, putative [Ricinus communis]
            gi|223550659|gb|EEF52146.1| abc transporter, putative
            [Ricinus communis]
          Length = 984

 Score =  453 bits (1165), Expect = e-125
 Identities = 212/328 (64%), Positives = 268/328 (81%)
 Frame = +1

Query: 1    ELTNFIEPALLSSHPMYNVQPECTPNSTFYVPITIGSTTFRQEVRCVQGINVWRSSSLVL 180
            E  NF++PA L + P+Y+VQ +CT NSTF V +      F++EV CVQG+N+WR+SS  +
Sbjct: 225  ERDNFLDPAFLEASPLYSVQRQCTSNSTFSVSVQ-SVIEFQKEVACVQGLNLWRNSSSEV 283

Query: 181  NEELYDGYRQANPDTKKINEFIAAYDFINTNEKNFNVSIWYNSTYQNATANSALGLLRVP 360
            NEELY GYR+ N + K INE ++AYDF+N+N  NFNVSIWYNSTY++         +RVP
Sbjct: 284  NEELYKGYRRGNLEGK-INEILSAYDFLNSNRNNFNVSIWYNSTYRDGEIQGQFNFVRVP 342

Query: 361  RSLNMLSNAYLQFFRGSAVKVLLEFVKEMPKPGTKVTLDFSSILGALFFTWVVLQLFPVI 540
            R++N++SNA+LQFF+G   K+LLEFVKEMPK  +K+ +D +S+LG LFF+WV+LQLFPV+
Sbjct: 343  RAVNLVSNAFLQFFQGPGTKMLLEFVKEMPKAASKINVDLASLLGTLFFSWVILQLFPVV 402

Query: 541  LTSLVYEKQRNLRIMMKMHGLGDGPYWMISYAYFLVLSLVYMTCFVVFGSLIGLKFFTLN 720
            LTSLVYEKQ+ LRIMMKMHGLGDGPYWMISYAYFL +SL+Y+  FV+FGS+IGLKFF LN
Sbjct: 403  LTSLVYEKQQKLRIMMKMHGLGDGPYWMISYAYFLSISLLYVLVFVIFGSVIGLKFFRLN 462

Query: 721  SYSIQIVFYFIYINLQIALAFLLATMFSNVKTATVVGQICVFSSGLLGAFLLQPFVQDTS 900
             YSIQ VFYFIYINLQI  AFL+A +FSNVKTATVV  ICVF +GLLG FL Q F++D+S
Sbjct: 463  DYSIQFVFYFIYINLQITFAFLVAALFSNVKTATVVAYICVFGTGLLGGFLFQNFLEDSS 522

Query: 901  FPRGWTVVMELFPGFSLYRGLYEFAQYS 984
            FPRGW +V+EL+PGF+LYRGLYEF++Y+
Sbjct: 523  FPRGWIIVLELYPGFTLYRGLYEFSEYA 550


>ref|XP_003523037.1| PREDICTED: ABC transporter A family member 7-like [Glycine max]
          Length = 949

 Score =  434 bits (1117), Expect = e-119
 Identities = 207/326 (63%), Positives = 257/326 (78%)
 Frame = +1

Query: 7    TNFIEPALLSSHPMYNVQPECTPNSTFYVPITIGSTTFRQEVRCVQGINVWRSSSLVLNE 186
            TNF+EPA  S  P+Y +Q +CT NSTF V + +   + +QEV C QG+ +WR+SS  +N 
Sbjct: 192  TNFLEPAFFSDLPIYYLQNQCTQNSTFSVSVQMSGISKQQEVICAQGLRLWRNSSSEVNN 251

Query: 187  ELYDGYRQANPDTKKINEFIAAYDFINTNEKNFNVSIWYNSTYQNATANSALGLLRVPRS 366
            ELY GY ++N + ++INE  A YDF+N+N   FNVSIWYNSTY+  T  + + L R+PRS
Sbjct: 252  ELYKGYWRSNIE-RQINEIAAGYDFLNSNGSIFNVSIWYNSTYKKDTGFNPIALARIPRS 310

Query: 367  LNMLSNAYLQFFRGSAVKVLLEFVKEMPKPGTKVTLDFSSILGALFFTWVVLQLFPVILT 546
            +N++SNAYLQF  G   K+  EFVKEMPKP T + LD +S+LG +FFTWV+LQLFP+ LT
Sbjct: 311  VNLVSNAYLQFLLGPGTKMFFEFVKEMPKPETPIKLDLASLLGGVFFTWVILQLFPIPLT 370

Query: 547  SLVYEKQRNLRIMMKMHGLGDGPYWMISYAYFLVLSLVYMTCFVVFGSLIGLKFFTLNSY 726
            SLVYEKQ+ LRIMMKMHGL DGPYWMISY YFL +S+VYM CFV+FGS+IGL FFT+N Y
Sbjct: 371  SLVYEKQQKLRIMMKMHGLDDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDY 430

Query: 727  SIQIVFYFIYINLQIALAFLLATMFSNVKTATVVGQICVFSSGLLGAFLLQPFVQDTSFP 906
            SIQ VFYFIYINLQI+LAFLLA++FSNVKTATV+  I +F +GLL  F    FVQDTSFP
Sbjct: 431  SIQSVFYFIYINLQISLAFLLASLFSNVKTATVLAYIGMFGTGLLADFPFHFFVQDTSFP 490

Query: 907  RGWTVVMELFPGFSLYRGLYEFAQYS 984
            RGW +VMEL+PGF+LYRGLYEF+QY+
Sbjct: 491  RGWIIVMELYPGFALYRGLYEFSQYA 516


>ref|NP_190363.3| ABC transporter A family member 8 [Arabidopsis thaliana]
            gi|332278217|sp|Q8LPK0.3|AB8A_ARATH RecName: Full=ABC
            transporter A family member 8; Short=ABC transporter
            ABCA.8; Short=AtABCA8; AltName: Full=ABC2 homolog 7
            gi|20466398|gb|AAM20516.1| ABC-type transport
            protein-like protein [Arabidopsis thaliana]
            gi|332644808|gb|AEE78329.1| ABC transporter A family
            member 8 [Arabidopsis thaliana]
          Length = 901

 Score =  432 bits (1112), Expect = e-119
 Identities = 203/324 (62%), Positives = 257/324 (79%)
 Frame = +1

Query: 7    TNFIEPALLSSHPMYNVQPECTPNSTFYVPITIGSTTFRQEVRCVQGINVWRSSSLVLNE 186
            TN ++ A +S  P+YN+Q EC+PNS+F + I      F +EV CVQG+N+WR+SS  +N 
Sbjct: 159  TNHMDSAFISDLPIYNIQHECSPNSSFSILIHQSPLAFPKEVNCVQGLNLWRNSSSDVNN 218

Query: 187  ELYDGYRQANPDTKKINEFIAAYDFINTNEKNFNVSIWYNSTYQNATANSALGLLRVPRS 366
            EL+ GYR+ NPD KKINEF  A+DF NTN  N NVS+WYNSTY+N T    + L+RVPR 
Sbjct: 219  ELFKGYRKGNPD-KKINEFAGAFDFQNTNGNNLNVSVWYNSTYKNDTVVRPMALIRVPRL 277

Query: 367  LNMLSNAYLQFFRGSAVKVLLEFVKEMPKPGTKVTLDFSSILGALFFTWVVLQLFPVILT 546
            +N+ SNAYL+F +GS  K+L E+VKEMPKP TK++LD +S++G LFFTWV+L LFPVILT
Sbjct: 278  VNLASNAYLEFLKGSETKILFEYVKEMPKPETKLSLDIASLIGPLFFTWVILLLFPVILT 337

Query: 547  SLVYEKQRNLRIMMKMHGLGDGPYWMISYAYFLVLSLVYMTCFVVFGSLIGLKFFTLNSY 726
            +LVYEKQ+ LRIMMKMHGLGD PYW++SY YFL++S++YM CF +FGSLIGL FF LN Y
Sbjct: 338  TLVYEKQQRLRIMMKMHGLGDVPYWIVSYTYFLLISILYMLCFAIFGSLIGLNFFRLNDY 397

Query: 727  SIQIVFYFIYINLQIALAFLLATMFSNVKTATVVGQICVFSSGLLGAFLLQPFVQDTSFP 906
            SIQ+VF+FI INLQI++AFL + MFS+VKTATV+  I VF +GLLG FL Q F++D  FP
Sbjct: 398  SIQLVFFFICINLQISVAFLASAMFSDVKTATVIAYIYVFGTGLLGIFLFQFFLEDPLFP 457

Query: 907  RGWTVVMELFPGFSLYRGLYEFAQ 978
            RGW + MEL+PGFSLYRGLYE +Q
Sbjct: 458  RGWIIAMELYPGFSLYRGLYELSQ 481


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