BLASTX nr result

ID: Coptis24_contig00021324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021324
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324585.1| predicted protein [Populus trichocarpa] gi|2...    68   3e-18
ref|XP_002531443.1| serine-threonine protein kinase, plant-type,...    66   7e-18
ref|XP_002264576.1| PREDICTED: LRR receptor-like serine/threonin...    61   2e-17
ref|XP_002338020.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-17
ref|XP_002324595.1| predicted protein [Populus trichocarpa] gi|2...    64   6e-17

>ref|XP_002324585.1| predicted protein [Populus trichocarpa] gi|222866019|gb|EEF03150.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score = 68.2 bits (165), Expect(2) = 3e-18
 Identities = 32/69 (46%), Positives = 45/69 (65%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L N+S++G +  P+   V+L+ +DIS+N IQ ++PT I   FP L  LNLS+N   G IP
Sbjct: 232 LVNSSLSGSLQLPNDSHVNLSRLDISRNHIQNQIPTKIGAYFPWLEFLNLSRNYFSGSIP 291

Query: 198 SSLGNMDGL 172
           SS+ NM  L
Sbjct: 292 SSISNMSSL 300



 Score = 48.1 bits (113), Expect(2) = 3e-18
 Identities = 30/57 (52%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 170 GVLDLSNNNFSGEIPESLAMSS-RLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           GVLDLSNN  SG IPE L      L  L+LSNN L GQ     FN   L  L L+GN
Sbjct: 301 GVLDLSNNGLSGNIPEQLVEGCLSLRGLVLSNNHLKGQFFWRSFNLAYLTDLILSGN 357



 Score = 42.7 bits (99), Expect(2) = 3e-08
 Identities = 25/69 (36%), Positives = 39/69 (56%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L+NN + G   + S  +  LT + +S NQ+ G LP ++S+    L  L++S N L G+IP
Sbjct: 330 LSNNHLKGQFFWRSFNLAYLTDLILSGNQLTGILPNSLSN-GSRLEALDVSLNNLSGKIP 388

Query: 198 SSLGNMDGL 172
             +G M  L
Sbjct: 389 RWIGYMSSL 397



 Score = 40.0 bits (92), Expect(2) = 3e-08
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = -3

Query: 191 WVTWMAC-GVLDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQISPNLFNNISLCTLR 15
           W+ +M+    LDLS NN  G +P S   S  ++ + LS N+L+G +   L   +SL  L 
Sbjct: 390 WIGYMSSLQYLDLSENNLYGSLPSSFCSSRTMTEVYLSKNKLEGSLIGALDGCLSLNRLD 449

Query: 14  LNGN 3
           L+ N
Sbjct: 450 LSHN 453



 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 23/54 (42%), Positives = 30/54 (55%)
 Frame = -3

Query: 164 LDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           LDLS+N F G IPES+     LS L+L  N L+G+I   L     L  + L+ N
Sbjct: 448 LDLSHNYFGGGIPESIGSLLELSFLLLGYNNLEGKIPSQLCKLEKLSLIDLSHN 501



 Score = 35.8 bits (81), Expect(2) = 2e-06
 Identities = 23/65 (35%), Positives = 39/65 (60%)
 Frame = -2

Query: 369 NSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIPSSL 190
           N+++G I      M SL  +D+S+N + G LP++      +++ + LSKN+LEG   S +
Sbjct: 381 NNLSGKIPRWIGYMSSLQYLDLSENNLYGSLPSSFCS-SRTMTEVYLSKNKLEG---SLI 436

Query: 189 GNMDG 175
           G +DG
Sbjct: 437 GALDG 441


>ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223528936|gb|EEF30930.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 912

 Score = 65.9 bits (159), Expect(2) = 7e-18
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L NNS++G +  P  P V+L  +DIS N +   +P  I    P L +LN+S N  +G IP
Sbjct: 381 LVNNSLSGHLQLPLHPHVNLLALDISNNHVHDHIPLEIGTFLPKLELLNMSSNGFDGSIP 440

Query: 198 SSLGNMDGL 172
           SS GNM+ L
Sbjct: 441 SSFGNMNSL 449



 Score = 49.3 bits (116), Expect(2) = 7e-18
 Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = -3

Query: 167 VLDLSNNNFSGEIPESLAMSS-RLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           +LDLSNN  SG IPE LA     L+ LILSNN L GQ+    FN  +L  L L+ N
Sbjct: 451 ILDLSNNQLSGSIPEHLATGCFSLNTLILSNNSLQGQMFSKQFNLTNLWWLELDKN 506



 Score = 46.6 bits (109), Expect(2) = 2e-09
 Identities = 24/70 (34%), Positives = 41/70 (58%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           +++N  +G I      M SL ++D+S NQ+ G +P +++    SL+ L LS N L+G++ 
Sbjct: 430 MSSNGFDGSIPSSFGNMNSLRILDLSNNQLSGSIPEHLATGCFSLNTLILSNNSLQGQMF 489

Query: 198 SSLGNMDGLW 169
           S   N+  LW
Sbjct: 490 SKQFNLTNLW 499



 Score = 39.7 bits (91), Expect(2) = 2e-09
 Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -3

Query: 164 LDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQISPNLFNNIS-LCTLRLNGN 3
           L+L  N+FSG IP+SL+ S+ LS++ LS+N L G I P    N+S L  L L+ N
Sbjct: 501 LELDKNHFSGRIPKSLSKSA-LSIMDLSDNHLSGMI-PGWIGNLSYLQNLILSNN 553



 Score = 48.5 bits (114), Expect(2) = 2e-07
 Identities = 24/69 (34%), Positives = 41/69 (59%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L+NNS+ G +      + +L  +++ KN   G++P ++S    +LSI++LS N L G IP
Sbjct: 479 LSNNSLQGQMFSKQFNLTNLWWLELDKNHFSGRIPKSLSK--SALSIMDLSDNHLSGMIP 536

Query: 198 SSLGNMDGL 172
             +GN+  L
Sbjct: 537 GWIGNLSYL 545



 Score = 31.2 bits (69), Expect(2) = 2e-07
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = -3

Query: 164 LDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           L LSNN   G IP        L VL L+NN + G I P+  +  S+  + L+ N
Sbjct: 548 LILSNNRLKGPIPVEFCQLHYLEVLDLANNSVSG-ILPSCLSPSSIIHVHLSQN 600



 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 27/69 (39%), Positives = 41/69 (59%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           LANNS++G +    SP  S+  + +S+N I+G   TN       L  L+LS NR+ GRIP
Sbjct: 574 LANNSVSGILPSCLSPS-SIIHVHLSQNMIEGPW-TNAFSGSHFLVTLDLSSNRITGRIP 631

Query: 198 SSLGNMDGL 172
           + +G ++ L
Sbjct: 632 TLIGGINAL 640



 Score = 36.6 bits (83), Expect(2) = 1e-06
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = -3

Query: 176 ACGVLDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQI 57
           A  +L+L +N F GEIP  +    +LS+++L++N L G I
Sbjct: 639 ALRILNLKSNRFDGEIPAQICGLYQLSLIVLADNNLSGSI 678


>ref|XP_002264576.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 1031

 Score = 60.8 bits (146), Expect(2) = 2e-17
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L NNS+ G+   P  P +    +D S N + G+L  N+ ++FP L  LNLS N  EG IP
Sbjct: 450 LRNNSLRGEFPLPPYPNIYTLWVDASHNHLGGRLKENMKEMFPYLRYLNLSGNGFEGHIP 509

Query: 198 SSLGN 184
           SS+GN
Sbjct: 510 SSIGN 514



 Score = 53.1 bits (126), Expect(2) = 2e-17
 Identities = 32/55 (58%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 164 LDLSNNNFSGEIPESLA-MSSRLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           LDLSNNNFSGE+P  L     RL +L LSNNRL GQI    FN   L  L LN N
Sbjct: 522 LDLSNNNFSGEVPVLLIERCPRLFILNLSNNRLHGQIFSTRFNMPELSFLGLNNN 576



 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = -2

Query: 378 LANNSINGDILFPSS---PMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEG 208
           L+ N   G I  PSS      +L  +D+S N   G++P  + +  P L ILNLS NRL G
Sbjct: 499 LSGNGFEGHI--PSSIGNQSSTLEALDLSNNNFSGEVPVLLIERCPRLFILNLSNNRLHG 556

Query: 207 RIPSSLGNMDGL 172
           +I S+  NM  L
Sbjct: 557 QIFSTRFNMPEL 568



 Score = 40.0 bits (92), Expect(2) = 2e-08
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = -3

Query: 164 LDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQISPNLFNNISLCTLRLN 9
           LD+SNN  SG+IP  +   + L  LILSNN   GQ+ P+ F  + L  L  N
Sbjct: 595 LDVSNNYMSGKIPTWMPNMTYLDTLILSNNSFHGQV-PHEFTRLKLLDLSDN 645



 Score = 39.7 bits (91), Expect(2) = 8e-07
 Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = -3

Query: 167 VLDLSNNNFSGEIPESLAMS-SRLSVLILSNNRLDGQISPNLFNNIS 30
           +LDLS N F+G+IP SL  + + L  L L +NRL+G++S + F+N S
Sbjct: 318 LLDLSLNQFTGKIPSSLISNLTSLEYLDLGSNRLEGRLSFSAFSNHS 364



 Score = 38.1 bits (87), Expect(2) = 8e-07
 Identities = 24/69 (34%), Positives = 33/69 (47%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L+NN   G I      + SL  + ++ NQ+ G LP        +L  L+LS N L+G  P
Sbjct: 248 LSNNRFTGSIPPYIWNLTSLQALSLADNQLTGPLPVEGFCKLKNLQELDLSGNSLDGMFP 307

Query: 198 SSLGNMDGL 172
             L NM  L
Sbjct: 308 PCLSNMRSL 316


>ref|XP_002338020.1| predicted protein [Populus trichocarpa] gi|222870336|gb|EEF07467.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 63.9 bits (154), Expect(2) = 5e-17
 Identities = 30/66 (45%), Positives = 43/66 (65%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L NNS++G     +  +V L+ +DIS+N+I  ++PT I   FP L  LNLS+N  +G IP
Sbjct: 161 LVNNSLSGSFQLANHSLVRLSHLDISRNRIHNQIPTEIGACFPRLVFLNLSRNDFDGSIP 220

Query: 198 SSLGNM 181
           SS+ NM
Sbjct: 221 SSISNM 226



 Score = 48.5 bits (114), Expect(2) = 5e-17
 Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = -3

Query: 167 VLDLSNNNFSGEIPESLAMSS-RLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           VLDLSNNN SG IPE L      L V++LSNN  +GQ+    FN   L  L L GN
Sbjct: 231 VLDLSNNNLSGNIPEQLVEGCLSLEVIMLSNNYFEGQLFWKNFNLTYLTELILRGN 286


>ref|XP_002324595.1| predicted protein [Populus trichocarpa] gi|222866029|gb|EEF03160.1|
           predicted protein [Populus trichocarpa]
          Length = 561

 Score = 64.3 bits (155), Expect(2) = 6e-17
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L NNS++G     +  +V L+ +DIS+N IQ ++P  I   FP L  LNLSKN   G IP
Sbjct: 21  LVNNSLSGSFQLANHSLVRLSHLDISRNHIQNQIPIEIGACFPRLVFLNLSKNNFSGSIP 80

Query: 198 SSLGNM 181
           SS+ NM
Sbjct: 81  SSISNM 86



 Score = 47.8 bits (112), Expect(2) = 6e-17
 Identities = 30/56 (53%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = -3

Query: 167 VLDLSNNNFSGEIPESLAMSS-RLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           VLDLSNN  SG IPE L  +   L VL+LSNN L GQ+    FN   L  L L GN
Sbjct: 91  VLDLSNNGLSGNIPEQLVENCLSLGVLMLSNNYLKGQLFWKNFNLTYLTELILRGN 146



 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 23/69 (33%), Positives = 40/69 (57%)
 Frame = -2

Query: 378 LANNSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIP 199
           L+NN + G + + +  +  LT + +  NQ+ G LP ++S+   +L  L++S N L G+IP
Sbjct: 119 LSNNYLKGQLFWKNFNLTYLTELILRGNQLTGILPNSLSNC-SALQALDVSLNNLSGKIP 177

Query: 198 SSLGNMDGL 172
             +G M  L
Sbjct: 178 RWIGYMSSL 186



 Score = 37.7 bits (86), Expect(2) = 2e-07
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -3

Query: 191 WVTWMAC-GVLDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQISPNLFNNISLCTLR 15
           W+ +M+    LDLS NN  G +P +   S  +  + LS N+L+G +   L   +SL  L 
Sbjct: 179 WIGYMSSLQYLDLSENNLFGSLPSNFCSSRMMIEVYLSKNKLEGSLIGALDGCLSLKRLD 238

Query: 14  LNGN 3
           L+ N
Sbjct: 239 LSHN 242



 Score = 41.6 bits (96), Expect(2) = 5e-07
 Identities = 24/54 (44%), Positives = 31/54 (57%)
 Frame = -3

Query: 164 LDLSNNNFSGEIPESLAMSSRLSVLILSNNRLDGQISPNLFNNISLCTLRLNGN 3
           LDLS+N F G IPES+  S  LSVL+L  N L+ +I   L     L  + L+ N
Sbjct: 237 LDLSHNYFKGGIPESIGSSLELSVLLLGYNNLEAEIPRQLCELKKLRLIDLSHN 290



 Score = 37.0 bits (84), Expect(2) = 5e-07
 Identities = 24/65 (36%), Positives = 37/65 (56%)
 Frame = -2

Query: 369 NSINGDILFPSSPMVSLTLIDISKNQIQGKLPTNISDIFPSLSILNLSKNRLEGRIPSSL 190
           N+++G I      M SL  +D+S+N + G LP+N       + +  LSKN+LEG   S +
Sbjct: 170 NNLSGKIPRWIGYMSSLQYLDLSENNLFGSLPSNFCSSRMMIEVY-LSKNKLEG---SLI 225

Query: 189 GNMDG 175
           G +DG
Sbjct: 226 GALDG 230


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