BLASTX nr result

ID: Coptis24_contig00021315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021315
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632684.1| PREDICTED: uncharacterized protein LOC100854...    64   2e-08
ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250...    63   2e-08
gb|ABK92800.1| unknown [Populus trichocarpa]                           62   5e-08
ref|XP_002308971.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002513166.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_003632684.1| PREDICTED: uncharacterized protein LOC100854383 [Vitis vinifera]
          Length = 67

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = +3

Query: 66  MAQVSNLSISKAALIFTIVAVFSIIA-VSAQD-APAPAPAYITGAAFSVSVSGAVLCSSL 239
           MAQVS   I+KA ++  +VA+FS  A VSA D +PAPAP+   G+AFS+ +SGAV+ SSL
Sbjct: 1   MAQVS---IAKALMLVFVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSL 57

Query: 240 IVSLLAFLKH 269
           + SLLAFLK+
Sbjct: 58  VFSLLAFLKY 67


>ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250444 [Vitis vinifera]
          Length = 67

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = +3

Query: 66  MAQVSNLSISKAALIFTIVAVFSIIA-VSAQD-APAPAPAYITGAAFSVSVSGAVLCSSL 239
           MAQVS   I+KA ++  +VA+FS  A VSA D +PAPAP+   G+AFS+ +SGAV+ SSL
Sbjct: 1   MAQVS---IAKAFMLVFVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSL 57

Query: 240 IVSLLAFLKH 269
           + SLLAFLK+
Sbjct: 58  VFSLLAFLKY 67


>gb|ABK92800.1| unknown [Populus trichocarpa]
          Length = 68

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
 Frame = +3

Query: 90  ISKAALIFTIVAVFSIIAVSAQD----APAPAPAYITGAAFSVSVSGAVLCSSLIVSLLA 257
           I KA L+F ++A F++  VSAQD    APAPAP    GA FS+ VSGA++  SL+VSLL 
Sbjct: 7   IPKAFLLFLLIAAFAV--VSAQDSESMAPAPAPGMEAGAGFSLPVSGAMVGFSLVVSLLG 64

Query: 258 FLKH 269
           FLKH
Sbjct: 65  FLKH 68


>ref|XP_002308971.1| predicted protein [Populus trichocarpa] gi|222854947|gb|EEE92494.1|
           predicted protein [Populus trichocarpa]
          Length = 66

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = +3

Query: 75  VSNLSISKAALIFTIVAVFSIIA-VSAQDAPAPAPAYITGAAFSVSVSGAVLCSSLIVSL 251
           ++ +S+SKA L   IVA+ S+ A VSAQ APAPAP+  TG  FS+   G ++  SL+VSL
Sbjct: 1   MAKVSVSKAVLFTFIVAMLSVAASVSAQLAPAPAPSMNTGTGFSLPAPGVIVGFSLMVSL 60

Query: 252 LAFLK 266
           LAFLK
Sbjct: 61  LAFLK 65


>ref|XP_002513166.1| conserved hypothetical protein [Ricinus communis]
           gi|223547664|gb|EEF49157.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 68

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
 Frame = +3

Query: 87  SISKAALIFTIVAVFSIIA-VSAQD----APAPAPAYITGAAFSVSVSGAVLCSSLIVSL 251
           S    A++F + A+ ++ A VSAQD    APAPAP+   GAA+S+ +SGAV+CSSL +S+
Sbjct: 3   SNQSVAVVFLLAALAAVAATVSAQDLGNLAPAPAPSMDKGAAYSLGMSGAVICSSLFLSM 62

Query: 252 LAFLKH 269
           +A LKH
Sbjct: 63  VALLKH 68


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