BLASTX nr result
ID: Coptis24_contig00021315
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021315 (438 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632684.1| PREDICTED: uncharacterized protein LOC100854... 64 2e-08 ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250... 63 2e-08 gb|ABK92800.1| unknown [Populus trichocarpa] 62 5e-08 ref|XP_002308971.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 ref|XP_002513166.1| conserved hypothetical protein [Ricinus comm... 60 2e-07 >ref|XP_003632684.1| PREDICTED: uncharacterized protein LOC100854383 [Vitis vinifera] Length = 67 Score = 63.5 bits (153), Expect = 2e-08 Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 2/70 (2%) Frame = +3 Query: 66 MAQVSNLSISKAALIFTIVAVFSIIA-VSAQD-APAPAPAYITGAAFSVSVSGAVLCSSL 239 MAQVS I+KA ++ +VA+FS A VSA D +PAPAP+ G+AFS+ +SGAV+ SSL Sbjct: 1 MAQVS---IAKALMLVFVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSL 57 Query: 240 IVSLLAFLKH 269 + SLLAFLK+ Sbjct: 58 VFSLLAFLKY 67 >ref|XP_002283124.1| PREDICTED: uncharacterized protein LOC100250444 [Vitis vinifera] Length = 67 Score = 63.2 bits (152), Expect = 2e-08 Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 2/70 (2%) Frame = +3 Query: 66 MAQVSNLSISKAALIFTIVAVFSIIA-VSAQD-APAPAPAYITGAAFSVSVSGAVLCSSL 239 MAQVS I+KA ++ +VA+FS A VSA D +PAPAP+ G+AFS+ +SGAV+ SSL Sbjct: 1 MAQVS---IAKAFMLVFVVAIFSAAATVSALDNSPAPAPSPDAGSAFSLPLSGAVVASSL 57 Query: 240 IVSLLAFLKH 269 + SLLAFLK+ Sbjct: 58 VFSLLAFLKY 67 >gb|ABK92800.1| unknown [Populus trichocarpa] Length = 68 Score = 62.0 bits (149), Expect = 5e-08 Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 4/64 (6%) Frame = +3 Query: 90 ISKAALIFTIVAVFSIIAVSAQD----APAPAPAYITGAAFSVSVSGAVLCSSLIVSLLA 257 I KA L+F ++A F++ VSAQD APAPAP GA FS+ VSGA++ SL+VSLL Sbjct: 7 IPKAFLLFLLIAAFAV--VSAQDSESMAPAPAPGMEAGAGFSLPVSGAMVGFSLVVSLLG 64 Query: 258 FLKH 269 FLKH Sbjct: 65 FLKH 68 >ref|XP_002308971.1| predicted protein [Populus trichocarpa] gi|222854947|gb|EEE92494.1| predicted protein [Populus trichocarpa] Length = 66 Score = 60.8 bits (146), Expect = 1e-07 Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Frame = +3 Query: 75 VSNLSISKAALIFTIVAVFSIIA-VSAQDAPAPAPAYITGAAFSVSVSGAVLCSSLIVSL 251 ++ +S+SKA L IVA+ S+ A VSAQ APAPAP+ TG FS+ G ++ SL+VSL Sbjct: 1 MAKVSVSKAVLFTFIVAMLSVAASVSAQLAPAPAPSMNTGTGFSLPAPGVIVGFSLMVSL 60 Query: 252 LAFLK 266 LAFLK Sbjct: 61 LAFLK 65 >ref|XP_002513166.1| conserved hypothetical protein [Ricinus communis] gi|223547664|gb|EEF49157.1| conserved hypothetical protein [Ricinus communis] Length = 68 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 5/66 (7%) Frame = +3 Query: 87 SISKAALIFTIVAVFSIIA-VSAQD----APAPAPAYITGAAFSVSVSGAVLCSSLIVSL 251 S A++F + A+ ++ A VSAQD APAPAP+ GAA+S+ +SGAV+CSSL +S+ Sbjct: 3 SNQSVAVVFLLAALAAVAATVSAQDLGNLAPAPAPSMDKGAAYSLGMSGAVICSSLFLSM 62 Query: 252 LAFLKH 269 +A LKH Sbjct: 63 VALLKH 68