BLASTX nr result

ID: Coptis24_contig00021312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021312
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31672.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...   189   3e-46
emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]   189   3e-46
emb|CBI30569.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...   182   3e-44

>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  189 bits (479), Expect = 3e-46
 Identities = 98/162 (60%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
 Frame = -2

Query: 514 SSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXP-----AGVGMGSIRPGSMADR 350
           SSV  YLDPPNWQQQ N+Q G S++N            P        G G+IRPGSMADR
Sbjct: 4   SSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSMADR 63

Query: 349 ARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGG 170
           AR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVPVGG
Sbjct: 64  ARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGG 123

Query: 169 GCXXXXXXXXXXXXSPNTAERQXXXXXXXXXXXXXXXSDIIG 44
           GC            SP T ERQ               SD+IG
Sbjct: 124 GCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIG 165


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score =  189 bits (479), Expect = 3e-46
 Identities = 98/162 (60%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
 Frame = -2

Query: 514 SSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXP-----AGVGMGSIRPGSMADR 350
           SSV  YLDPPNWQQQ N+Q G S++N            P        G G+IRPGSMADR
Sbjct: 4   SSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSMADR 63

Query: 349 ARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGG 170
           AR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVPVGG
Sbjct: 64  ARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGG 123

Query: 169 GCXXXXXXXXXXXXSPNTAERQXXXXXXXXXXXXXXXSDIIG 44
           GC            SP T ERQ               SD+IG
Sbjct: 124 GCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIG 165


>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score =  189 bits (479), Expect = 3e-46
 Identities = 98/162 (60%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
 Frame = -2

Query: 514 SSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXP-----AGVGMGSIRPGSMADR 350
           SSV  YLDPPNWQQQ N+Q G S++N            P        G G+IRPGSMADR
Sbjct: 4   SSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSMADR 63

Query: 349 ARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGG 170
           AR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVPVGG
Sbjct: 64  ARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGG 123

Query: 169 GCXXXXXXXXXXXXSPNTAERQXXXXXXXXXXXXXXXSDIIG 44
           GC            SP T ERQ               SD+IG
Sbjct: 124 GCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIG 165


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  182 bits (461), Expect = 3e-44
 Identities = 89/138 (64%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
 Frame = -2

Query: 514 SSVLGYLDPPNWQQQGNYQHGNSS-ENXXXXXXXXXXXXPAGVGMGSIRPGSMADRARMA 338
           SS+  YLDP NWQQ  N++ G+S   N              G G GSIRPGSMADRAR+A
Sbjct: 4   SSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRARLA 63

Query: 337 KVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCXX 158
            +P PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC  
Sbjct: 64  NIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 123

Query: 157 XXXXXXXXXXSPNTAERQ 104
                     SP + +RQ
Sbjct: 124 NKRSKGSSSKSPVSGDRQ 141


>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score =  182 bits (461), Expect = 3e-44
 Identities = 89/138 (64%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
 Frame = -2

Query: 514 SSVLGYLDPPNWQQQGNYQHGNSS-ENXXXXXXXXXXXXPAGVGMGSIRPGSMADRARMA 338
           SS+  YLDP NWQQ  N++ G+S   N              G G GSIRPGSMADRAR+A
Sbjct: 4   SSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRARLA 63

Query: 337 KVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCXX 158
            +P PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGC  
Sbjct: 64  NIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 123

Query: 157 XXXXXXXXXXSPNTAERQ 104
                     SP + +RQ
Sbjct: 124 NKRSKGSSSKSPVSGDRQ 141


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