BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021311
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    61   8e-08
emb|CBI30403.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002528114.1| double-stranded RNA binding protein, putativ...    57   2e-06

>ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 2-like [Vitis vinifera]
          Length = 789

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
 Frame = -1

Query: 200 QAAENALHTLADEYNAYVAANPGSVDEILSMLPPKNENGFLWD--DAESDE---EEALPD 36
           QAAENALH+LAD+Y AY   + G+VD+    L   NENGFLWD   A S E   E+  P 
Sbjct: 665 QAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGSSELLMEDGFPK 724

Query: 35  ARTSEAG 15
              SEAG
Sbjct: 725 ESISEAG 731


>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
 Frame = -1

Query: 200 QAAENALHTLADEYNAYVAANPGSVDEILSMLPPKNENGFLWD--DAESDE---EEALPD 36
           QAAENALH+LAD+Y AY   + G+VD+    L   NENGFLWD   A S E   E+  P 
Sbjct: 729 QAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTTSAGSSELLMEDGFPK 788

Query: 35  ARTSEAG 15
              SEAG
Sbjct: 789 ESISEAG 795


>ref|XP_002528114.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223532503|gb|EEF34293.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 786

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -1

Query: 200 QAAENALHTLADEYNAYVAANPGSVDEILSMLPPKNENGFLWDDAESDEEEALPD 36
           QAAENAL  LA++Y AY+  + G+VD     L   NENGFLWD   S   E +P+
Sbjct: 661 QAAENALRCLAEKYVAYITPHSGAVDHDFDKLSIGNENGFLWDIVNSGSSETVPE 715