BLASTX nr result
ID: Coptis24_contig00021309
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00021309 (1369 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-li... 499 e-139 ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-li... 499 e-139 ref|XP_003590636.1| WD repeat-containing protein [Medicago trunc... 494 e-137 emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera] 483 e-134 ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [V... 483 e-134 >ref|XP_004158942.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus] Length = 335 Score = 499 bits (1286), Expect = e-139 Identities = 236/305 (77%), Positives = 272/305 (89%), Gaps = 2/305 (0%) Frame = +1 Query: 55 FRAYRHYKSLTTHKQAVSCVKFSNDGSLLASSSLDKTLIVYSSQTLSSLSHLIGHSAGVS 234 ++ YRH K+LT H +AVSCVKFSNDG+LLAS+SLDKTLI++SS +L+ L+GHS G+S Sbjct: 31 YKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGIS 90 Query: 235 DFSWSLDSHYICSASDDKTLRIWDARS--GESVKTLRGHSGFVFCVDFNPQSNLIVSGSF 408 D +WS DSHYICSASDD+TLRIWDARS GE VKTLRGHS FVFCV+FNPQSNLIVSGSF Sbjct: 91 DLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 150 Query: 409 DETVRVWDVKTGKVIHVIRAHAMPVTSVHFIRDGSIIVSGSHDGKCKIWDAATGACLKTL 588 DET+R+W+VKTGK +HVIRAH+MPVTSVHF RDGS+IVSGSHDG CKIWDA++G CLKTL Sbjct: 151 DETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLKTL 210 Query: 589 IDEKDGPAVSFAKFSPNGKFVLVATLDDNLRLWNYSTGRYIKNYLGHVNKVYCITSTFSV 768 ID+K PAVSFAKFSPNGKF+LVATL+D L+LWNYS G+++K Y GHVN+V+C+ STFSV Sbjct: 211 IDDKV-PAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFSV 269 Query: 769 TNGKYIVSGSEDHCVYIWDLQGKNMVQKLVGHTDSVISVSCHPTENKIASAGLDNDRTVR 948 TNGKYIVSGSED CVYIWDLQ K M+QKL GHTD VISVSCHPTENKIASAGLD DR+VR Sbjct: 270 TNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVR 329 Query: 949 IWVQD 963 +WVQD Sbjct: 330 VWVQD 334 >ref|XP_004147003.1| PREDICTED: WD repeat-containing protein 5-like [Cucumis sativus] Length = 358 Score = 499 bits (1286), Expect = e-139 Identities = 236/305 (77%), Positives = 272/305 (89%), Gaps = 2/305 (0%) Frame = +1 Query: 55 FRAYRHYKSLTTHKQAVSCVKFSNDGSLLASSSLDKTLIVYSSQTLSSLSHLIGHSAGVS 234 ++ YRH K+LT H +AVSCVKFSNDG+LLAS+SLDKTLI++SS +L+ L+GHS G+S Sbjct: 54 YKPYRHLKTLTAHTRAVSCVKFSNDGTLLASASLDKTLIIWSSSSLTLRHRLVGHSEGIS 113 Query: 235 DFSWSLDSHYICSASDDKTLRIWDARS--GESVKTLRGHSGFVFCVDFNPQSNLIVSGSF 408 D +WS DSHYICSASDD+TLRIWDARS GE VKTLRGHS FVFCV+FNPQSNLIVSGSF Sbjct: 114 DLAWSSDSHYICSASDDRTLRIWDARSPTGECVKTLRGHSDFVFCVNFNPQSNLIVSGSF 173 Query: 409 DETVRVWDVKTGKVIHVIRAHAMPVTSVHFIRDGSIIVSGSHDGKCKIWDAATGACLKTL 588 DET+R+W+VKTGK +HVIRAH+MPVTSVHF RDGS+IVSGSHDG CKIWDA++G CLKTL Sbjct: 174 DETIRIWEVKTGKCLHVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWDASSGTCLKTL 233 Query: 589 IDEKDGPAVSFAKFSPNGKFVLVATLDDNLRLWNYSTGRYIKNYLGHVNKVYCITSTFSV 768 ID+K PAVSFAKFSPNGKF+LVATL+D L+LWNYS G+++K Y GHVN+V+C+ STFSV Sbjct: 234 IDDKV-PAVSFAKFSPNGKFILVATLNDTLKLWNYSAGKFLKIYTGHVNRVHCVVSTFSV 292 Query: 769 TNGKYIVSGSEDHCVYIWDLQGKNMVQKLVGHTDSVISVSCHPTENKIASAGLDNDRTVR 948 TNGKYIVSGSED CVYIWDLQ K M+QKL GHTD VISVSCHPTENKIASAGLD DR+VR Sbjct: 293 TNGKYIVSGSEDKCVYIWDLQQKTMIQKLEGHTDVVISVSCHPTENKIASAGLDGDRSVR 352 Query: 949 IWVQD 963 +WVQD Sbjct: 353 VWVQD 357 >ref|XP_003590636.1| WD repeat-containing protein [Medicago truncatula] gi|355479684|gb|AES60887.1| WD repeat-containing protein [Medicago truncatula] gi|388501300|gb|AFK38716.1| unknown [Medicago truncatula] Length = 316 Score = 494 bits (1273), Expect = e-137 Identities = 235/304 (77%), Positives = 269/304 (88%) Frame = +1 Query: 55 FRAYRHYKSLTTHKQAVSCVKFSNDGSLLASSSLDKTLIVYSSQTLSSLSHLIGHSAGVS 234 ++ YRH+K+LTTH +AVSCVKFSNDG+LLAS+SLDKTLI+YSS TLS L L GHS G++ Sbjct: 14 YKPYRHHKTLTTHTRAVSCVKFSNDGNLLASASLDKTLIIYSSTTLSLLHRLTGHSEGIN 73 Query: 235 DFSWSLDSHYICSASDDKTLRIWDARSGESVKTLRGHSGFVFCVDFNPQSNLIVSGSFDE 414 D +WS DSHYICSASDDKTLRIWDA +G+ VKTLRGH VFCV+FNPQSN IVSGSFDE Sbjct: 74 DIAWSSDSHYICSASDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNPQSNYIVSGSFDE 133 Query: 415 TVRVWDVKTGKVIHVIRAHAMPVTSVHFIRDGSIIVSGSHDGKCKIWDAATGACLKTLID 594 TVRVW+VKTGK +HVI+AHAMPVTSV F RDGS+IVSGSHDG CKIWD +GA LKTLID Sbjct: 134 TVRVWEVKTGKSVHVIKAHAMPVTSVDFNRDGSLIVSGSHDGSCKIWDTNSGALLKTLID 193 Query: 595 EKDGPAVSFAKFSPNGKFVLVATLDDNLRLWNYSTGRYIKNYLGHVNKVYCITSTFSVTN 774 +K PAVSFAKFSPNGKF+LVATL+D L+LWNY+ GR +K Y GHVN+VYC+TSTFSVTN Sbjct: 194 DK-VPAVSFAKFSPNGKFILVATLNDTLKLWNYAAGRSLKMYSGHVNRVYCLTSTFSVTN 252 Query: 775 GKYIVSGSEDHCVYIWDLQGKNMVQKLVGHTDSVISVSCHPTENKIASAGLDNDRTVRIW 954 G+YIVSGSED C+Y+WDLQ KNM+QKL GHTD+VISV+CHP ENKIASAGLD DRTVRIW Sbjct: 253 GRYIVSGSEDRCLYLWDLQQKNMIQKLEGHTDTVISVTCHPKENKIASAGLDGDRTVRIW 312 Query: 955 VQDT 966 VQD+ Sbjct: 313 VQDS 316 >emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera] Length = 315 Score = 483 bits (1244), Expect = e-134 Identities = 232/303 (76%), Positives = 264/303 (87%) Frame = +1 Query: 55 FRAYRHYKSLTTHKQAVSCVKFSNDGSLLASSSLDKTLIVYSSQTLSSLSHLIGHSAGVS 234 +R YR ++L H +AVSCVKFS+DG+LLAS+SLDKTLIV+SSQTL+ S L+GHS G+S Sbjct: 13 YRPYRLLRTLAAHDRAVSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSRLVGHSGGIS 72 Query: 235 DFSWSLDSHYICSASDDKTLRIWDARSGESVKTLRGHSGFVFCVDFNPQSNLIVSGSFDE 414 D +WS DSHYICSASDD TLRIWDA+S E VKTLRGH+ VFCV+FNPQSNLIVSGSFDE Sbjct: 73 DLAWSSDSHYICSASDDLTLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSFDE 132 Query: 415 TVRVWDVKTGKVIHVIRAHAMPVTSVHFIRDGSIIVSGSHDGKCKIWDAATGACLKTLID 594 TVR+WDVKTG+ +H I AH+MPVTSV+F RDGS+IVSGSHDG CKIW + TGA LKTLI Sbjct: 133 TVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHDGSCKIWASDTGALLKTLI- 191 Query: 595 EKDGPAVSFAKFSPNGKFVLVATLDDNLRLWNYSTGRYIKNYLGHVNKVYCITSTFSVTN 774 E +GPA+SFAKFSPNGK++LVATLDD L+LWNYSTG+ +K Y GHVNKVYCI S FSVT Sbjct: 192 EDNGPAISFAKFSPNGKYILVATLDDTLKLWNYSTGKSLKIYTGHVNKVYCIASAFSVTY 251 Query: 775 GKYIVSGSEDHCVYIWDLQGKNMVQKLVGHTDSVISVSCHPTENKIASAGLDNDRTVRIW 954 GKYIVSGSED CVY+WDLQGKN +QKL GHTD+VISVSCHP ENKIASAGLD DRTVRIW Sbjct: 252 GKYIVSGSEDKCVYVWDLQGKNPLQKLEGHTDTVISVSCHPNENKIASAGLDXDRTVRIW 311 Query: 955 VQD 963 VQD Sbjct: 312 VQD 314 >ref|XP_002278415.1| PREDICTED: WD repeat-containing protein 5 [Vitis vinifera] Length = 315 Score = 483 bits (1242), Expect = e-134 Identities = 231/303 (76%), Positives = 264/303 (87%) Frame = +1 Query: 55 FRAYRHYKSLTTHKQAVSCVKFSNDGSLLASSSLDKTLIVYSSQTLSSLSHLIGHSAGVS 234 +R YR ++L H +AVSCVKFS+DG+LLAS+SLDKTLIV+SSQTL+ S L+GHS G+S Sbjct: 13 YRPYRLLRTLAAHDRAVSCVKFSSDGTLLASASLDKTLIVWSSQTLTLKSRLVGHSGGIS 72 Query: 235 DFSWSLDSHYICSASDDKTLRIWDARSGESVKTLRGHSGFVFCVDFNPQSNLIVSGSFDE 414 D +WS DSHYICSASDD TLRIWDA+S E VKTLRGH+ VFCV+FNPQSNLIVSGSFDE Sbjct: 73 DLAWSSDSHYICSASDDLTLRIWDAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSGSFDE 132 Query: 415 TVRVWDVKTGKVIHVIRAHAMPVTSVHFIRDGSIIVSGSHDGKCKIWDAATGACLKTLID 594 TVR+WDVKTG+ +H I AH+MPVTSV+F RDGS+IVSGSHDG CKIW + TGA LKTLI Sbjct: 133 TVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHDGSCKIWASDTGALLKTLI- 191 Query: 595 EKDGPAVSFAKFSPNGKFVLVATLDDNLRLWNYSTGRYIKNYLGHVNKVYCITSTFSVTN 774 E +GPA+SFAKFSPNGK++LVATLDD L+LWNYSTG+ +K Y GHVNKVYCI S FSVT Sbjct: 192 EDNGPAISFAKFSPNGKYILVATLDDTLKLWNYSTGKSLKIYTGHVNKVYCIASAFSVTY 251 Query: 775 GKYIVSGSEDHCVYIWDLQGKNMVQKLVGHTDSVISVSCHPTENKIASAGLDNDRTVRIW 954 GKYIVSGSED CVY+WDLQGKN +QKL GHTD+VISVSCHP ENKIASAGLD D+TVRIW Sbjct: 252 GKYIVSGSEDKCVYVWDLQGKNPLQKLEGHTDTVISVSCHPNENKIASAGLDGDKTVRIW 311 Query: 955 VQD 963 VQD Sbjct: 312 VQD 314