BLASTX nr result

ID: Coptis24_contig00021301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021301
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274058.2| PREDICTED: uncharacterized protein LOC100249...   248   5e-64
emb|CBI40797.3| unnamed protein product [Vitis vinifera]              248   5e-64
ref|XP_002510757.1| conserved hypothetical protein [Ricinus comm...   244   7e-63
ref|XP_002307831.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-61
ref|XP_003616924.1| hypothetical protein MTR_5g085780 [Medicago ...   238   4e-61

>ref|XP_002274058.2| PREDICTED: uncharacterized protein LOC100249580 [Vitis vinifera]
          Length = 529

 Score =  248 bits (632), Expect = 5e-64
 Identities = 115/168 (68%), Positives = 135/168 (80%), Gaps = 7/168 (4%)
 Frame = +2

Query: 35  TTMVLWTWLITILHVLVVVGVCASGEP-------VVSRIAFGSCANQSSPQPIWNGIIDF 193
           + + LW     ++ V++ + +  S          +VSRIAFGSCANQS+PQPIWN IIDF
Sbjct: 72  SVLELWLLWSVVMRVMIALPIAYSASSTSSQEALLVSRIAFGSCANQSAPQPIWNAIIDF 131

Query: 194 DPQVFIWLGDNIYGDVKRPFKLFGRERTIGPWKNVPRFVPASETEMQFKYKKAKSNAGYS 373
           DPQ+FIWLGDNIYGDV+RPFKLFG+ERTIGPWKNVPRF+P+SE EMQ +YKK K+N GYS
Sbjct: 132 DPQIFIWLGDNIYGDVRRPFKLFGKERTIGPWKNVPRFIPSSEREMQSRYKKTKTNPGYS 191

Query: 374 LLRKKTQVIGTWDDHDYGLNDAGKEFSGKNISQRLLLDFLDEPHDSPR 517
            L + T+VIGTWDDHDYGLNDAGKEF+GK  SQRLLLDFLDEP DSPR
Sbjct: 192 RLLENTKVIGTWDDHDYGLNDAGKEFNGKITSQRLLLDFLDEPQDSPR 239


>emb|CBI40797.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  248 bits (632), Expect = 5e-64
 Identities = 115/168 (68%), Positives = 135/168 (80%), Gaps = 7/168 (4%)
 Frame = +2

Query: 35  TTMVLWTWLITILHVLVVVGVCASGEP-------VVSRIAFGSCANQSSPQPIWNGIIDF 193
           + + LW     ++ V++ + +  S          +VSRIAFGSCANQS+PQPIWN IIDF
Sbjct: 4   SVLELWLLWSVVMRVMIALPIAYSASSTSSQEALLVSRIAFGSCANQSAPQPIWNAIIDF 63

Query: 194 DPQVFIWLGDNIYGDVKRPFKLFGRERTIGPWKNVPRFVPASETEMQFKYKKAKSNAGYS 373
           DPQ+FIWLGDNIYGDV+RPFKLFG+ERTIGPWKNVPRF+P+SE EMQ +YKK K+N GYS
Sbjct: 64  DPQIFIWLGDNIYGDVRRPFKLFGKERTIGPWKNVPRFIPSSEREMQSRYKKTKTNPGYS 123

Query: 374 LLRKKTQVIGTWDDHDYGLNDAGKEFSGKNISQRLLLDFLDEPHDSPR 517
            L + T+VIGTWDDHDYGLNDAGKEF+GK  SQRLLLDFLDEP DSPR
Sbjct: 124 RLLENTKVIGTWDDHDYGLNDAGKEFNGKITSQRLLLDFLDEPQDSPR 171


>ref|XP_002510757.1| conserved hypothetical protein [Ricinus communis]
           gi|223551458|gb|EEF52944.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 438

 Score =  244 bits (622), Expect = 7e-63
 Identities = 109/157 (69%), Positives = 130/157 (82%), Gaps = 1/157 (0%)
 Frame = +2

Query: 50  WTWLITILHVLVV-VGVCASGEPVVSRIAFGSCANQSSPQPIWNGIIDFDPQVFIWLGDN 226
           W W + ++ V+V  V      EP+++RIAFGSCANQS+PQPIWN I+DFDPQVFIWLGDN
Sbjct: 7   WRWCLILIFVIVTGVASATEEEPLLTRIAFGSCANQSAPQPIWNAIVDFDPQVFIWLGDN 66

Query: 227 IYGDVKRPFKLFGRERTIGPWKNVPRFVPASETEMQFKYKKAKSNAGYSLLRKKTQVIGT 406
           IYGD++RPFK+FG+ERTIGPWKN PRF+P+S  EM+  Y +AK+N GYS LR+  +VIGT
Sbjct: 67  IYGDIRRPFKIFGQERTIGPWKNAPRFIPSSHYEMESSYHQAKANPGYSRLRRTAKVIGT 126

Query: 407 WDDHDYGLNDAGKEFSGKNISQRLLLDFLDEPHDSPR 517
           WDDHDYGLNDAGKEF  K I+QRLLLDFLDEP DSPR
Sbjct: 127 WDDHDYGLNDAGKEFDRKVINQRLLLDFLDEPQDSPR 163


>ref|XP_002307831.1| predicted protein [Populus trichocarpa] gi|222857280|gb|EEE94827.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  239 bits (611), Expect = 1e-61
 Identities = 108/134 (80%), Positives = 120/134 (89%)
 Frame = +2

Query: 116 VVSRIAFGSCANQSSPQPIWNGIIDFDPQVFIWLGDNIYGDVKRPFKLFGRERTIGPWKN 295
           VV+RIAFGSCANQS+PQPIWN IIDFDPQVFIWLGDN+YGD KRPFKLFG+ERTIGPWKN
Sbjct: 7   VVTRIAFGSCANQSAPQPIWNAIIDFDPQVFIWLGDNVYGDTKRPFKLFGKERTIGPWKN 66

Query: 296 VPRFVPASETEMQFKYKKAKSNAGYSLLRKKTQVIGTWDDHDYGLNDAGKEFSGKNISQR 475
            PRF+P+S  E++ +Y+KAKSN GYS LR  TQVIGTWDDHDYGLNDAGKEF GK  +Q+
Sbjct: 67  APRFIPSSPKELESRYQKAKSNPGYSRLRHTTQVIGTWDDHDYGLNDAGKEFGGKITNQK 126

Query: 476 LLLDFLDEPHDSPR 517
           LLLDFLDEP DSPR
Sbjct: 127 LLLDFLDEPQDSPR 140


>ref|XP_003616924.1| hypothetical protein MTR_5g085780 [Medicago truncatula]
           gi|355518259|gb|AES99882.1| hypothetical protein
           MTR_5g085780 [Medicago truncatula]
           gi|388500888|gb|AFK38510.1| unknown [Medicago
           truncatula]
          Length = 442

 Score =  238 bits (607), Expect = 4e-61
 Identities = 110/162 (67%), Positives = 131/162 (80%), Gaps = 5/162 (3%)
 Frame = +2

Query: 47  LWTWLITILHVLVVVGVCASG-----EPVVSRIAFGSCANQSSPQPIWNGIIDFDPQVFI 211
           LW   +  +  + V    AS      + +VSRIAFGSC+NQS+PQPIW+ ++DF+PQVFI
Sbjct: 13  LWRCFLVFIGTVTVATTAASDTHKNRQHLVSRIAFGSCSNQSAPQPIWDAVVDFNPQVFI 72

Query: 212 WLGDNIYGDVKRPFKLFGRERTIGPWKNVPRFVPASETEMQFKYKKAKSNAGYSLLRKKT 391
            LGDNIYGD KRPFK+FGRERTIGPWKNVPRF+PASE EM+ KY+KAKSN GY+ L++  
Sbjct: 73  LLGDNIYGDNKRPFKIFGRERTIGPWKNVPRFLPASEQEMEAKYQKAKSNPGYARLKESA 132

Query: 392 QVIGTWDDHDYGLNDAGKEFSGKNISQRLLLDFLDEPHDSPR 517
           +VIGTWDDHDYGLNDAGKEF GK  +Q+LLLDFLDEPHDSPR
Sbjct: 133 EVIGTWDDHDYGLNDAGKEFDGKKTNQKLLLDFLDEPHDSPR 174


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