BLASTX nr result
ID: Coptis24_contig00021293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00021293
(1983 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera] 130 4e-28
ref|XP_002530585.1| nascent polypeptide associated complex alpha... 105 6e-20
ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-17
ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243... 97 2e-17
ref|XP_002533865.1| conserved hypothetical protein [Ricinus comm... 96 4e-17
>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
Length = 689
Score = 130 bits (327), Expect(2) = 4e-28
Identities = 96/337 (28%), Positives = 157/337 (46%), Gaps = 9/337 (2%)
Frame = +3
Query: 264 LVERWWDTTHTFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 443
L ERWWDTT T HFP EVG+TP DF ++TG+ +G G+ IP+ N + R
Sbjct: 105 LAERWWDTTGTLHFPFGEVGMTPYDFSVITGLRIG-GKPIPY----------NAGVHRSE 153
Query: 444 PDCFETKG----IKLSAFSHHYISATQNNSLQPEANSEEETE-YVRAFLLYFLGQCLFNC 608
D + G + + S ++ +N + N++ + E + RAF+LY G +F
Sbjct: 154 DDLLKALGSRPPVIRGSVSCSWLFENFHNVV---CNTDRDRECHTRAFILYLFGCTMFGT 210
Query: 609 GHSGVRLGYLTGLLDLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWF 788
V L L L D+++I EYDWGGA L ++ +R A + + G+ + E+W
Sbjct: 211 LDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCTHMNSVSRGKAHR--LGGLWKVWEIWS 268
Query: 789 YEYLASMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHIS--RQQIEIRSIDSIR 962
YEY + + L V D ++PR W + E H + + R+ I +I+ +
Sbjct: 269 YEYFSLLAPSLK-VDDSMAFPRSLRW-WGGSEFEMCPKHRMVDLKNFREAINNLTIEMVN 326
Query: 963 WRPWERSRHMSDGIVKFAATLSRFRVILTSHDHKAYYLGDRCWRQATG--EIAVPRDPPA 1136
W PW ++ A LSR R++ + ++LG+R Q G + VP PP
Sbjct: 327 WNPWGEIEPTLPPEIRHAKELSRRRILFEGPSGQFWFLGERLSMQTLGSPQPMVPLPPPM 386
Query: 1137 NMLSSKDIPDETVDYHRANGWIDAIHFLDYDIDYSEY 1247
+M + E ++ A F+D+ +Y ++
Sbjct: 387 SMRLTASFSAEELE--GCFKGFPAERFIDHSGNYDDF 421
Score = 22.7 bits (47), Expect(2) = 4e-28
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 160 IISLVERWW 186
+ISL ERWW
Sbjct: 102 VISLAERWW 110
>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
[Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
polypeptide associated complex alpha subunit, putative
[Ricinus communis]
Length = 687
Score = 105 bits (261), Expect = 6e-20
Identities = 78/291 (26%), Positives = 134/291 (46%)
Frame = +3
Query: 264 LVERWWDTTHTFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 443
LVER++ THT H E+G TPL + M+TG++ G P D E + + +
Sbjct: 269 LVERYFSETHTLHLGTFEIGPTPLAWTMITGITFGGDPLNPPDITPEECIKLLGLVGTES 328
Query: 444 PDCFETKGIKLSAFSHHYISATQNNSLQPEANSEEETEYVRAFLLYFLGQCLFNCGHSGV 623
F +KL T + +P ANS+ E + R +LY +G C F+ +
Sbjct: 329 EGFFSQGKLKLDVLC----PLTLDFRKKP-ANSDLEWMF-RRLILYLVGSCFFSGPDMMI 382
Query: 624 RLGYLTGLLDLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYEYLA 803
+ ++ + +++KI +YDWG AT RG+ T S +G G +P L +W YE++
Sbjct: 383 PIRLVSAMSNIQKISQYDWGAATFSAFLRGMRHKT--SECRGTFSGFYPFLLLWAYEHIP 440
Query: 804 SMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHISRQQIEIRSIDSIRWRPWERS 983
+ N D D +PR + W + K ++ R ++E D + + P+
Sbjct: 441 YQRPLTN--FDPDIFPRARQW---DLTKMDVPNSNDFTWYRLELEYLEEDEVNFDPY--G 493
Query: 984 RHMSDGIVKFAATLSRFRVILTSHDHKAYYLGDRCWRQATGEIAVPRDPPA 1136
+ + +++ LS+ R+ + Y+G+R RQ G + +P PPA
Sbjct: 494 KLWEEEGLEYERELSQKRIAFLGLESWELYMGERNLRQFGGGVRIPHSPPA 544
>ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|222844566|gb|EEE82113.1|
predicted protein [Populus trichocarpa]
Length = 416
Score = 97.1 bits (240), Expect = 2e-17
Identities = 92/340 (27%), Positives = 144/340 (42%), Gaps = 12/340 (3%)
Frame = +3
Query: 264 LVERWWDTTHTFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 443
LVERW T+TFHF E+ +T D +L G+++ I H + + + L A
Sbjct: 68 LVERWRRETNTFHFTVGEMTVTLQDVALLLGLAIDGKPVIGITHT--TCASVCEGLLGKA 125
Query: 444 PDCFETKG--IKLSAFSHHYISATQNNSLQPEANSEEETEYVRAFLLYFLGQCLFNCGHS 617
PD G +KLS + ++ +A EE RA+LLY +G +F+
Sbjct: 126 PDSSYASGGMVKLSWLKEFFSHCSE------DAPIEEVEHCTRAYLLYLVGSTIFSTTTG 179
Query: 618 G-VRLGYLTGLLDLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYE 794
V + YL E+ EY WG A L LYR L A S + + G +L+ W Y
Sbjct: 180 NKVPVMYLPLFAYFEEAGEYAWGAAALAFLYRALGNACVKS--QSTICGCLTLLQCWSYF 237
Query: 795 YLASMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHISRQQIEIRSIDSIRWRPW 974
+L LN HD +P + W + T+ ++ R+ ++ + W P+
Sbjct: 238 HLNVGRPKLNRDPIHDHFPFVLRW---KGKQSGPTTNRDVVFYRKALDSLKTTDVEWLPY 294
Query: 975 E-RSRHMSDGIVKFAATLSRFRVILTSHDHKAYYLGDRCWRQATGEIAVPRDPPANMLSS 1151
+ + +K L R + +L D +L DRC RQ +P D + S
Sbjct: 295 KIMDSTVIPKDIKNTLILGRSKTMLICFDKAERHLPDRCLRQYGMLQPIPEDVERWLRKS 354
Query: 1152 KDIPDETVDY-----HRANGWID-AIHFLDYD--IDYSEY 1247
+ + D VD N W+D +H +D D +D S+Y
Sbjct: 355 RGV-DGGVDLSGKMESELNEWMDRQLHIVDGDDGVDESDY 393
>ref|XP_002267999.2| PREDICTED: uncharacterized protein LOC100243242 [Vitis vinifera]
Length = 532
Score = 96.7 bits (239), Expect = 2e-17
Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 9/366 (2%)
Frame = +3
Query: 324 ITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLAPDCFETKGIK----LSAFSH 491
+TP DF ++TG+ +G G+ IP+ N + R D + G + + S
Sbjct: 1 MTPYDFSVITGLRIG-GKPIPY----------NAGVHRSEDDLLKALGSRPPVIRGSVSC 49
Query: 492 HYISATQNNSLQPEANSEEETE-YVRAFLLYFLGQCLFNCGHSGVRLGYLTGLLDLEKIW 668
++ +N + N++ + E + RAF+LY G +F V L L L D+++I
Sbjct: 50 SWLFENFHNVV---CNTDRDRECHTRAFILYLFGCTMFGTLDCKVNLNSLPALEDVDRIG 106
Query: 669 EYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYEYLASMNAILNDVHDHDSW 848
EYDWGGA L ++ +R A + + G+ + E+W YEY + + L V D ++
Sbjct: 107 EYDWGGAAYAALCTHMNSVSRGKAHR--LGGLWKVWEIWSYEYFSLLAPSLK-VDDSMAF 163
Query: 849 PRMKAWCYENRAKEFHETHHNIHIS--RQQIEIRSIDSIRWRPWERSRHMSDGIVKFAAT 1022
PR W + E H + + R+ I +I+ + W PW ++ A
Sbjct: 164 PRSLRW-WGGSEFEMCPKHRMVDLKNFREAINNLTIEMVNWNPWGEIEPTLPPEIRHAKE 222
Query: 1023 LSRFRVILTSHDHKAYYLGDRCWRQATG--EIAVPRDPPANMLSSKDIPDETVDYHRANG 1196
LSR R++ + ++LG+R Q G + VP PP +M + E ++
Sbjct: 223 LSRRRILFEGPSGQFWFLGERLSMQTLGSPQPMVPLPPPMSMRLTASFSAEELE--GCFK 280
Query: 1197 WIDAIHFLDYDIDYSEYWHRVSIGPLLPAVYRAGNIDMIGRDGIRPELRIPGPASPQSHP 1376
A F+D+ +Y ++ + P + + ++G++ +PG + P
Sbjct: 281 GFPAERFIDHSGNYDDFCASFLMPPFRNSDQDVRSQGETSKEGLQ---ILPGDIQIPNRP 337
Query: 1377 RSYNAY 1394
S+N Y
Sbjct: 338 -SWNVY 342
>ref|XP_002533865.1| conserved hypothetical protein [Ricinus communis]
gi|223526187|gb|EEF28515.1| conserved hypothetical
protein [Ricinus communis]
Length = 918
Score = 95.9 bits (237), Expect = 4e-17
Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 18/351 (5%)
Frame = +3
Query: 264 LVERWWDTTHTFHFPCAEVGITPLDFVMLTGMSVGIGQTIPFDHALESLTYMNKYLPRLA 443
LVERW T+TFHF E+ +T D +L G+++ I H SL + + L A
Sbjct: 79 LVERWRRETNTFHFGVGEMTVTLQDVALLLGLAIDGRPVIGITHTTCSL--VCERLLGKA 136
Query: 444 PDCFETKG--IKLSAFSHHYISATQNNSLQPEANSEEETEYVRAFLLYFLGQCLFNCGHS 617
PD G +KLS ++ +N A EE RA+LLY +G +F+
Sbjct: 137 PDSSYASGGMVKLSWLKEYFSHCPEN------APIEEVERCTRAYLLYLVGSTIFSTTTG 190
Query: 618 G-VRLGYLTGLLDLEKIWEYDWGGATLCHLYRGLDRATRSSAAKGQVVGVHPILEVWFYE 794
V + YL + E+ + WG A L LYR L A S + + G +L+ W Y
Sbjct: 191 NKVPVMYLPLFENFEEAGNFAWGAAALAFLYRALGNACVKS--QSTICGCLTLLQCWSYF 248
Query: 795 YLASMNAILNDVHDHDSWPRMKAWCYENRAKEFHETHHNIHISRQQIEIRSIDSIRWRPW 974
+L LN HD +P + W + T+ ++ R+ ++ + W P+
Sbjct: 249 HLNIGRPKLNRDPIHDHFPFVLRW---KGKQSGPTTNRDVVFYRKALDSLKPSDVEWLPY 305
Query: 975 ERSRHMSDGI----VKFAATLSRFRVILTSHDHKAYYLGDRCWRQATGEIAVPRDPPANM 1142
++M + +K L R + +L D +L DRC RQ +P D +
Sbjct: 306 ---KYMDSTVIPEDIKDTLILGRSKTMLICFDKAERHLPDRCLRQYGMLQPIPEDVVRWI 362
Query: 1143 LSSKDIPDETVDY-----HRANGWID-AIHFLDYD-----IDYSEYWHRVS 1262
S+ + D VD N W D ++ +D D I+Y +++ R++
Sbjct: 363 RKSRGV-DGGVDLSGKMESELNEWSDRRLYIVDGDDGVDEIEYMQWYSRIT 412