BLASTX nr result

ID: Coptis24_contig00021292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021292
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20819.3| unnamed protein product [Vitis vinifera]              182   6e-44
ref|XP_002283505.1| PREDICTED: acetylglutamate kinase, chloropla...   182   6e-44
ref|XP_002878162.1| aspartate/glutamate/uridylate kinase family ...   181   2e-43
ref|XP_002330834.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002336878.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43

>emb|CBI20819.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  182 bits (463), Expect = 6e-44
 Identities = 106/233 (45%), Positives = 139/233 (59%), Gaps = 24/233 (10%)
 Frame = +1

Query: 4   VGIRPILVHGGGQDINKWFARLRIQ--FLNGIIITDVPTKKITSDYMLIKKVHTHLVSFV 177
           VG+RP+ VHGGG +IN W  R  ++  FLNG+ +TD  T +I +  +L+ KV+ HLVS +
Sbjct: 152 VGLRPVFVHGGGPEINLWLGRFGLEPNFLNGLRVTDHSTMEIVT-MVLVGKVNKHLVSLI 210

Query: 178 KQ----------------DTRQCSTSSSCGFIVGDIACFDPTVSAPLTKRGYIPVIAAVG 309
            +                  R    S+  GF VGD+A  DPT+  PL    +IPVIA+V 
Sbjct: 211 NKAGATAVGLSGMDGRLLTARPNPNSAQLGF-VGDVARVDPTILRPLIDNNHIPVIASVA 269

Query: 310 AD------TVNTDTXXXXXXXXXXXXXXIFSTDVAGIFLNKQDPGSLVQRIDIEGVKRMV 471
           +D       +N DT              I  TDVAGI  N+ DP SLV++IDI+GVK+M 
Sbjct: 270 SDETGQSYNINADTVAGELAASLGAEKLILLTDVAGILENRDDPSSLVKQIDIKGVKKME 329

Query: 472 DEGKVVGELVSKVNCCVHSLKEGVRTTSIINRMIRHSLLTEILTDDGAGTMIT 630
            EGK+ G ++ KVNCCV SL +GVRT SII+  + HSLL EILTD+GAGTMIT
Sbjct: 330 GEGKIGGGMIPKVNCCVRSLAQGVRTASIIDGRLPHSLLLEILTDEGAGTMIT 382


>ref|XP_002283505.1| PREDICTED: acetylglutamate kinase, chloroplastic [Vitis vinifera]
          Length = 351

 Score =  182 bits (463), Expect = 6e-44
 Identities = 106/233 (45%), Positives = 139/233 (59%), Gaps = 24/233 (10%)
 Frame = +1

Query: 4   VGIRPILVHGGGQDINKWFARLRIQ--FLNGIIITDVPTKKITSDYMLIKKVHTHLVSFV 177
           VG+RP+ VHGGG +IN W  R  ++  FLNG+ +TD  T +I +  +L+ KV+ HLVS +
Sbjct: 120 VGLRPVFVHGGGPEINLWLGRFGLEPNFLNGLRVTDHSTMEIVT-MVLVGKVNKHLVSLI 178

Query: 178 KQ----------------DTRQCSTSSSCGFIVGDIACFDPTVSAPLTKRGYIPVIAAVG 309
            +                  R    S+  GF VGD+A  DPT+  PL    +IPVIA+V 
Sbjct: 179 NKAGATAVGLSGMDGRLLTARPNPNSAQLGF-VGDVARVDPTILRPLIDNNHIPVIASVA 237

Query: 310 AD------TVNTDTXXXXXXXXXXXXXXIFSTDVAGIFLNKQDPGSLVQRIDIEGVKRMV 471
           +D       +N DT              I  TDVAGI  N+ DP SLV++IDI+GVK+M 
Sbjct: 238 SDETGQSYNINADTVAGELAASLGAEKLILLTDVAGILENRDDPSSLVKQIDIKGVKKME 297

Query: 472 DEGKVVGELVSKVNCCVHSLKEGVRTTSIINRMIRHSLLTEILTDDGAGTMIT 630
            EGK+ G ++ KVNCCV SL +GVRT SII+  + HSLL EILTD+GAGTMIT
Sbjct: 298 GEGKIGGGMIPKVNCCVRSLAQGVRTASIIDGRLPHSLLLEILTDEGAGTMIT 350


>ref|XP_002878162.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297324000|gb|EFH54421.1|
           aspartate/glutamate/uridylate kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  181 bits (458), Expect = 2e-43
 Identities = 105/233 (45%), Positives = 142/233 (60%), Gaps = 24/233 (10%)
 Frame = +1

Query: 4   VGIRPILVHGGGQDINKWFARLRI--QFLNGIIITDVPTKKITSDYMLIKKVHTHLVSFV 177
           VG+RPILVHGGG DIN++  +L I  +F +G+ +TD  T +I S  +L+ KV+ +LVS +
Sbjct: 115 VGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVS-MVLVGKVNKNLVSLI 173

Query: 178 KQ----------------DTRQCSTSSSCGFIVGDIACFDPTVSAPLTKRGYIPVIAAVG 309
                               R    S+  GF VG++A  DP+V  PL   GYIPVIA+V 
Sbjct: 174 NAAGATAVGLSGHDGRLLTARPVPNSAQLGF-VGEVARVDPSVLRPLVDYGYIPVIASVA 232

Query: 310 AD------TVNTDTXXXXXXXXXXXXXXIFSTDVAGIFLNKQDPGSLVQRIDIEGVKRMV 471
           AD       +N DT              I  TDVAGI  NK+DP SLV+ IDI+GVK+M+
Sbjct: 233 ADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLVKEIDIKGVKKMI 292

Query: 472 DEGKVVGELVSKVNCCVHSLKEGVRTTSIINRMIRHSLLTEILTDDGAGTMIT 630
           ++GKV G ++ KV CC+ SL +GV+T SII+   +HSLL EI++D+GAGTMIT
Sbjct: 293 EDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMIT 345


>ref|XP_002330834.1| predicted protein [Populus trichocarpa] gi|222872636|gb|EEF09767.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  181 bits (458), Expect = 2e-43
 Identities = 104/233 (44%), Positives = 140/233 (60%), Gaps = 24/233 (10%)
 Frame = +1

Query: 4   VGIRPILVHGGGQDINKWFARLRIQ--FLNGIIITDVPTKKITSDYMLIKKVHTHLVSFV 177
           VG+RP+LVHGGG +IN W   L I+  F  G+ +TD  T +I S  +L+ KV+  LVS +
Sbjct: 61  VGLRPVLVHGGGPEINHWLKLLNIEPLFHEGLRVTDAKTMEIVS-MVLVGKVNKDLVSLI 119

Query: 178 KQD----------------TRQCSTSSSCGFIVGDIACFDPTVSAPLTKRGYIPVIAAVG 309
            +                  +  S S+  GF VG++A  DPT+  PL   G+IPVIA+V 
Sbjct: 120 NKAGATAVGLSGMDGRLLMAKPTSKSAQLGF-VGEVARVDPTILQPLVNNGHIPVIASVA 178

Query: 310 AD------TVNTDTXXXXXXXXXXXXXXIFSTDVAGIFLNKQDPGSLVQRIDIEGVKRMV 471
           AD       +N DT              I  TDVAGI  NK DPGSL++ IDI+GVK+++
Sbjct: 179 ADELGQSYNINADTVAGEVAAALGAEKLILLTDVAGILENKDDPGSLLKEIDIKGVKKLI 238

Query: 472 DEGKVVGELVSKVNCCVHSLKEGVRTTSIINRMIRHSLLTEILTDDGAGTMIT 630
           DE KV G ++ KVNCCV SL +GVRT SII+  ++HSLL EI++++G GTMIT
Sbjct: 239 DEKKVAGGMIPKVNCCVASLSQGVRTASIIDGRVQHSLLHEIMSEEGIGTMIT 291


>ref|XP_002336878.1| predicted protein [Populus trichocarpa] gi|222837045|gb|EEE75424.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  181 bits (458), Expect = 2e-43
 Identities = 104/233 (44%), Positives = 140/233 (60%), Gaps = 24/233 (10%)
 Frame = +1

Query: 4   VGIRPILVHGGGQDINKWFARLRIQ--FLNGIIITDVPTKKITSDYMLIKKVHTHLVSFV 177
           VG+RP+LVHGGG +IN W   L I+  F  G+ +TD  T +I S  +L+ KV+  LVS +
Sbjct: 48  VGLRPVLVHGGGPEINHWLKLLNIEPLFHEGLRVTDAKTMEIVS-MVLVGKVNKDLVSLI 106

Query: 178 KQD----------------TRQCSTSSSCGFIVGDIACFDPTVSAPLTKRGYIPVIAAVG 309
            +                  +  S S+  GF VG++A  DPT+  PL   G+IPVIA+V 
Sbjct: 107 NKAGATAVGLSGMDGRLLMAKPTSKSAQLGF-VGEVARVDPTILQPLVNNGHIPVIASVA 165

Query: 310 AD------TVNTDTXXXXXXXXXXXXXXIFSTDVAGIFLNKQDPGSLVQRIDIEGVKRMV 471
           AD       +N DT              I  TDVAGI  NK DPGSL++ IDI+GVK+++
Sbjct: 166 ADELGQSYNINADTVAGEVAAALGAEKLILLTDVAGILENKDDPGSLLKEIDIKGVKKLI 225

Query: 472 DEGKVVGELVSKVNCCVHSLKEGVRTTSIINRMIRHSLLTEILTDDGAGTMIT 630
           DE KV G ++ KVNCCV SL +GVRT SII+  ++HSLL EI++++G GTMIT
Sbjct: 226 DEKKVAGGMIPKVNCCVASLSQGVRTASIIDGRVQHSLLHEIMSEEGIGTMIT 278


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