BLASTX nr result

ID: Coptis24_contig00021291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00021291
         (198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442327.1| hypothetical protein SORBIDRAFT_08g018260 [S...    55   8e-06

>ref|XP_002442327.1| hypothetical protein SORBIDRAFT_08g018260 [Sorghum bicolor]
           gi|241943020|gb|EES16165.1| hypothetical protein
           SORBIDRAFT_08g018260 [Sorghum bicolor]
          Length = 576

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/62 (43%), Positives = 36/62 (58%)
 Frame = +1

Query: 1   RQYEATLARVNSNYFGANPIFRDHDFRCRFRMGQLLFTRIFNYLNHNVPYFQQKVNCAGK 180
           R  EA   R+  +YF  NP++ D  FR R+RM + LF +I   LN   PYFQQ+ +  GK
Sbjct: 72  RDREAGQNRLIRDYFSTNPVYTDEQFRRRYRMRRHLFLQIVQALNDWSPYFQQRSDATGK 131

Query: 181 FG 186
            G
Sbjct: 132 LG 133


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